G508499


Basic Information

Item Value
gene id G508499
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 42054952 ~ 42055151 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU577232
CCTCCTCCCACATGGCCAGCTCTTCCTTGGTCAACAGAAAGTAGTGGGAGACGAGACGCCGTCCGATCTCTGTGAGGGTGGGGTGTGTAAAGAATGCAGTCTTGATCTTGTGGGCCTCCAGACTCTCCGGCTTACTGTCTGAGAGGGGCGACCCAGAGAGCATGTAAGaacttacacacagacacacacacacactattc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU577232 True 200 lncRNA 0.54 1 42054952 42055151

Neighbor

gene id symbol gene type direction distance location
htr1aa LOC106585208 coding upstream 280997 41771717 ~ 41773955 (+)
LOC118964870 NA coding upstream 297749 41754679 ~ 41757203 (+)
c7a c7-2 coding upstream 325571 41723173 ~ 41729381 (+)
plcxd3 plcxd3 coding upstream 354831 41678773 ~ 41700121 (+)
oxct1a LOC106580620 coding upstream 377279 41571004 ~ 41677673 (+)
paxx ci142 coding downstream 81902 42137053 ~ 42143608 (+)
LOC110525988 LOC106584966 coding downstream 189354 42244505 ~ 42249266 (+)
stxbp1b LOC106585214 coding downstream 317380 42372531 ~ 42415108 (+)
camsap1b LOC106585218 coding downstream 548157 42603308 ~ 42645904 (+)
LOC110525996 LOC106585219 coding downstream 590883 42646034 ~ 42655499 (+)
G508497 NA non-coding upstream 2738 42051995 ~ 42052214 (+)
G508484 NA non-coding upstream 17025 42037679 ~ 42037927 (+)
G508481 NA non-coding upstream 20395 42033911 ~ 42034557 (+)
G508474 NA non-coding upstream 33184 42021426 ~ 42021768 (+)
G508473 NA non-coding upstream 33645 42021092 ~ 42021307 (+)
G508530 NA non-coding downstream 37470 42092621 ~ 42092883 (+)
G508531 NA non-coding downstream 38042 42093193 ~ 42093407 (+)
G508537 NA non-coding downstream 43910 42099061 ~ 42099268 (+)
G508539 NA non-coding downstream 45476 42100627 ~ 42100834 (+)
G508542 NA non-coding downstream 49717 42104868 ~ 42105092 (+)
G507768 LOC105030512 other upstream 583544 41469551 ~ 41471408 (+)
fbxl17 fbxl17 other upstream 1195430 40568637 ~ 40886427 (+)
G506285 NA other upstream 1488523 40566067 ~ 40566429 (+)
G506281 LOC106585187 other upstream 1507439 40544863 ~ 40547513 (+)
LOC110525949 LOC106585178 other upstream 1795902 40256994 ~ 40259050 (+)
G508559 dph7 other downstream 74074 42129225 ~ 42131940 (+)
G509160 NA other downstream 511954 42567105 ~ 42570169 (+)
G510416 NA other downstream 1602317 43657468 ~ 43658493 (+)
G512192 LOC106584908 other downstream 3129288 45184439 ~ 45185869 (+)
LOC110526028 ccdc60 other downstream 3162576 45187119 ~ 45236944 (+)

Expression


Co-expression Network