G508530


Basic Information

Item Value
gene id G508530
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 42092621 ~ 42092883 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU577264
ctccaataatcggtatcgttatcggcattgaaaaatcataatcggtcgacctctagtattgatacatcatccaaagtgtaattaataacttcaccatgcgcaaagggatattcaatgtccgctttttatttttatccatctaggtgcccttctttgcgaagcattggaaaacctccctggtctttgtggttgaatctgtgtttgaaatccactgctcgactgaggtaccttgcagataattgtatgtgtgggttacaTAGATG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU577264 True 263 lncRNA 0.40 1 42092621 42092883

Neighbor

gene id symbol gene type direction distance location
htr1aa LOC106585208 coding upstream 318666 41771717 ~ 41773955 (+)
LOC118964870 NA coding upstream 335418 41754679 ~ 41757203 (+)
c7a c7-2 coding upstream 363240 41723173 ~ 41729381 (+)
plcxd3 plcxd3 coding upstream 392500 41678773 ~ 41700121 (+)
oxct1a LOC106580620 coding upstream 414948 41571004 ~ 41677673 (+)
paxx ci142 coding downstream 44170 42137053 ~ 42143608 (+)
LOC110525988 LOC106584966 coding downstream 151622 42244505 ~ 42249266 (+)
stxbp1b LOC106585214 coding downstream 279648 42372531 ~ 42415108 (+)
camsap1b LOC106585218 coding downstream 510425 42603308 ~ 42645904 (+)
LOC110525996 LOC106585219 coding downstream 553151 42646034 ~ 42655499 (+)
G508499 NA non-coding upstream 37470 42054952 ~ 42055151 (+)
G508497 NA non-coding upstream 40407 42051995 ~ 42052214 (+)
G508484 NA non-coding upstream 54694 42037679 ~ 42037927 (+)
G508481 NA non-coding upstream 58064 42033911 ~ 42034557 (+)
G508474 NA non-coding upstream 70853 42021426 ~ 42021768 (+)
G508531 NA non-coding downstream 310 42093193 ~ 42093407 (+)
G508537 NA non-coding downstream 6178 42099061 ~ 42099268 (+)
G508539 NA non-coding downstream 7744 42100627 ~ 42100834 (+)
G508542 NA non-coding downstream 11985 42104868 ~ 42105092 (+)
G508554 NA non-coding downstream 30634 42123517 ~ 42124026 (+)
G507768 LOC105030512 other upstream 621213 41469551 ~ 41471408 (+)
fbxl17 fbxl17 other upstream 1233099 40568637 ~ 40886427 (+)
G506285 NA other upstream 1526192 40566067 ~ 40566429 (+)
G506281 LOC106585187 other upstream 1545108 40544863 ~ 40547513 (+)
LOC110525949 LOC106585178 other upstream 1833571 40256994 ~ 40259050 (+)
G508559 dph7 other downstream 36342 42129225 ~ 42131940 (+)
G509160 NA other downstream 474222 42567105 ~ 42570169 (+)
G510416 NA other downstream 1564585 43657468 ~ 43658493 (+)
G512192 LOC106584908 other downstream 3091556 45184439 ~ 45185869 (+)
LOC110526028 ccdc60 other downstream 3124844 45187119 ~ 45236944 (+)

Expression


Co-expression Network