G509045


Basic Information

Item Value
gene id G509045
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 42386073 ~ 42386706 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU577814
ttattaggctgtttttacatcagcagtaACAACTTGCTTTACAGTTACCCGTCCTATACACAAAAATGTTGGTCACTTTCGCAAAAATCCTAGGTtgtccagaaatcctggttggaatatTCCCGGAATCAGGATAGAATAAGCAAGAAATCtgtgaatcctccaaccaggaatTTATGAATTTATGACCTGCAGGTGGCACTGTATcagtgtgtgagactgtgtgggTGAGGTAATGTAATCCTATTTGACTGCATTGATTCCCAAATGACTGACAATACAGTACGGTGTTGTAGGATCAGATGGGACATCTTTCATTAATTCCTCCAGCCTTGAGAAAGGCAGTTAAACCCAAACAGCAACTGCTCCCTGGGCTCCGATGATGTGGacgtcaattaaggcagccccccgtacctttctgattcagagaggttgagttaaatgcggaagacgcaTTTCAGTTGAATCCACTCAGTTGTGCAAATGACTATGAATCCCTTTTCCCCTTCCCATTTCTTTCCCTTATGACTGATttctgaaatcaaatcaaataaagctttatttatacagcacgtTTCCGACATGGAATGCAACGCAATGTGCTttac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU577814 True 608 lncRNA 0.42 2 42386073 42386706

Neighbor

gene id symbol gene type direction distance location
LOC110525990 LOC106585213 coding downstream 25681 42302921 ~ 42360392 (-)
npdc1b LOC106585212 coding downstream 84324 42252483 ~ 42301749 (-)
LOC110525987 LOC106585210 coding downstream 144635 42146502 ~ 42241438 (-)
dph7 dph7 coding downstream 247018 42129218 ~ 42139055 (-)
ipo11 ipo11 coding downstream 262009 41889859 ~ 42124064 (-)
LOC118964871 NA coding upstream 18133 42404839 ~ 42417077 (-)
LOC110525992 LOC106585216 coding upstream 36705 42422990 ~ 42520495 (-)
noxa1 noxa1 coding upstream 153158 42539864 ~ 42549214 (-)
LOC110525994 LOC106585220 coding upstream 189823 42576529 ~ 42587286 (-)
LOC110525997 LOC106585221 coding upstream 268278 42654984 ~ 42729594 (-)
G508888 NA non-coding downstream 242233 42142383 ~ 42143840 (-)
G508902 NA non-coding downstream 265682 42120186 ~ 42120391 (-)
G508899 NA non-coding downstream 270331 42115494 ~ 42115742 (-)
G508884 NA non-coding downstream 282559 42103030 ~ 42103514 (-)
G508882 NA non-coding downstream 283923 42101869 ~ 42102150 (-)
G509034 LOC106585214 non-coding upstream 12270 42372441 ~ 42403220 (-)
G509058 NA non-coding upstream 31119 42417825 ~ 42418041 (-)
G509059 NA non-coding upstream 31405 42418111 ~ 42418353 (-)
G509281 NA non-coding upstream 32577 42419283 ~ 42420286 (-)
G508891 NA other downstream 241188 42144097 ~ 42144885 (-)
G508303 NA other downstream 564863 41820855 ~ 41821210 (-)
G507906 selenop other downstream 924151 41421024 ~ 41461922 (-)
znf131 znf131 other downstream 947059 41431651 ~ 41459095 (-)
G507063 NA other downstream 1843744 40540659 ~ 40542329 (-)
G509432 NA other upstream 256813 42643519 ~ 42645869 (-)
G509902 NA other upstream 689986 43076692 ~ 43077157 (-)
G509949 LOC106578716 other upstream 735840 43122546 ~ 43123092 (-)
G509952 NA other upstream 737875 43124581 ~ 43125387 (-)
G510310 NA other upstream 1137008 43523714 ~ 43524108 (-)

Expression


Co-expression Network