G509058



Basic Information


Item Value
gene id G509058
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 42417825 ~ 42418041 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU577827
gttgacgttgagactggtgttttgcgggtactatttaatgaagttgccagttgaggacttgtgaggcgtctgtttctcaaactagacactaatgtacctCTTGCTCATTTGTTTGCGCTGTTTTGtgaatggagtagtacacagcgttgtgccAGATCTTAagttcttggcaatttcttgcatggaatagccttaatttctcagaacaagaatagac

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU577827 True 217 lncRNA 0.41 1 42417825 42418041

Neighbor


gene id symbol gene type direction distance location
LOC118964871 NA coding downstream 4574 42404839 ~ 42417077 (-)
LOC110525990 LOC106585213 coding downstream 57433 42302921 ~ 42360392 (-)
npdc1b LOC106585212 coding downstream 116076 42252483 ~ 42301749 (-)
LOC110525987 LOC106585210 coding downstream 176387 42146502 ~ 42241438 (-)
dph7 dph7 coding downstream 278770 42129218 ~ 42139055 (-)
LOC110525992 LOC106585216 coding upstream 5370 42422990 ~ 42520495 (-)
noxa1 noxa1 coding upstream 121823 42539864 ~ 42549214 (-)
LOC110525994 LOC106585220 coding upstream 158488 42576529 ~ 42587286 (-)
LOC110525997 LOC106585221 coding upstream 236943 42654984 ~ 42729594 (-)
LOC110525998 LOC106585223 coding upstream 348498 42766320 ~ 42788488 (-)
G509034 LOC106585214 non-coding downstream 15595 42372441 ~ 42403220 (-)
G509045 NA non-coding downstream 31119 42386073 ~ 42386706 (-)
G508888 NA non-coding downstream 273985 42142383 ~ 42143840 (-)
G508902 NA non-coding downstream 297434 42120186 ~ 42120391 (-)
G509059 NA non-coding upstream 70 42418111 ~ 42418353 (-)
G509281 NA non-coding upstream 1242 42419283 ~ 42420286 (-)
G509283 NA non-coding upstream 7501 42425542 ~ 42425753 (-)
G509284 NA non-coding upstream 8242 42426283 ~ 42426615 (-)
G508891 NA other downstream 272940 42144097 ~ 42144885 (-)
G508303 NA other downstream 596615 41820855 ~ 41821210 (-)
G507906 selenop other downstream 955903 41421024 ~ 41461922 (-)
G509432 NA other upstream 225478 42643519 ~ 42645869 (-)
G509902 NA other upstream 658651 43076692 ~ 43077157 (-)
G509949 LOC106578716 other upstream 704505 43122546 ~ 43123092 (-)
G509952 NA other upstream 706540 43124581 ~ 43125387 (-)
G510310 NA other upstream 1105673 43523714 ~ 43524108 (-)

Expression



Co-expression Network