Gene
RNA
| Item | Value |
|---|---|
| gene id | G509064 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 42428305 ~ 42428596 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU577833 | True | 292 | lncRNA | 0.45 | 1 | 42428305 | 42428596 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| stxbp1b | LOC106585214 | coding | upstream | 13197 | 42372531 ~ 42415108 (+) |
| LOC110525988 | LOC106584966 | coding | upstream | 179039 | 42244505 ~ 42249266 (+) |
| paxx | ci142 | coding | upstream | 284697 | 42137053 ~ 42143608 (+) |
| htr1aa | LOC106585208 | coding | upstream | 654350 | 41771717 ~ 41773955 (+) |
| LOC118964870 | NA | coding | upstream | 671102 | 41754679 ~ 41757203 (+) |
| camsap1b | LOC106585218 | coding | downstream | 174712 | 42603308 ~ 42645904 (+) |
| LOC110525996 | LOC106585219 | coding | downstream | 217438 | 42646034 ~ 42655499 (+) |
| LOC118964872 | NA | coding | downstream | 350665 | 42779261 ~ 42780791 (+) |
| LOC110525999 | LOC106585222 | coding | downstream | 381718 | 42810314 ~ 42825158 (+) |
| LOC118965026 | LOC106585222 | coding | downstream | 401215 | 42829811 ~ 42836106 (+) |
| G509062 | NA | non-coding | upstream | 6159 | 42421342 ~ 42422146 (+) |
| G509061 | NA | non-coding | upstream | 7122 | 42419592 ~ 42421183 (+) |
| G509060 | NA | non-coding | upstream | 9329 | 42418721 ~ 42418976 (+) |
| G508717 | NA | non-coding | upstream | 56112 | 42371964 ~ 42372193 (+) |
| G508677 | LOC106585213 | non-coding | upstream | 95812 | 42319892 ~ 42332493 (+) |
| G509068 | NA | non-coding | downstream | 3765 | 42432361 ~ 42432614 (+) |
| G509070 | NA | non-coding | downstream | 7618 | 42436214 ~ 42436446 (+) |
| G509077 | NA | non-coding | downstream | 13770 | 42442366 ~ 42442584 (+) |
| G509078 | NA | non-coding | downstream | 14518 | 42443114 ~ 42443323 (+) |
| G509080 | NA | non-coding | downstream | 16634 | 42445230 ~ 42445437 (+) |
| G508559 | dph7 | other | upstream | 296365 | 42129225 ~ 42131940 (+) |
| G507768 | LOC105030512 | other | upstream | 956897 | 41469551 ~ 41471408 (+) |
| fbxl17 | fbxl17 | other | upstream | 1568783 | 40568637 ~ 40886427 (+) |
| G506285 | NA | other | upstream | 1861876 | 40566067 ~ 40566429 (+) |
| G506281 | LOC106585187 | other | upstream | 1880792 | 40544863 ~ 40547513 (+) |
| G509160 | NA | other | downstream | 138509 | 42567105 ~ 42570169 (+) |
| G510416 | NA | other | downstream | 1228872 | 43657468 ~ 43658493 (+) |
| G512192 | LOC106584908 | other | downstream | 2755843 | 45184439 ~ 45185869 (+) |
| LOC110526028 | ccdc60 | other | downstream | 2789131 | 45187119 ~ 45236944 (+) |
| G512912 | NA | other | downstream | 3206993 | 45635589 ~ 45636250 (+) |
