G509068


Basic Information

Item Value
gene id G509068
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 42432361 ~ 42432614 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU577837
CTGTTTGGATGCCAGTGCTGCAGGTCCCTGGGCCACTTGGGACTGCTGTGTGGCCTGGTTCTTACTGGGCCGAGGACTGCTGTCTTTACTCAGCCCTCCTGCCTCAGCAATGTCCACCCCACTGTCCTCACTCAGAGTCTGACCACTGTCTGACAGTTGGGACAATGTGGCGCCTGGATACACAGAAGTAATAGATTCGATTATATATACacctttcctaatattgagttgaacccccttttgacctcagaaca

Function

NR:

description
whirlin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU577837 True 254 lncRNA 0.52 1 42432361 42432614

Neighbor

gene id symbol gene type direction distance location
stxbp1b LOC106585214 coding upstream 17253 42372531 ~ 42415108 (+)
LOC110525988 LOC106584966 coding upstream 183095 42244505 ~ 42249266 (+)
paxx ci142 coding upstream 288753 42137053 ~ 42143608 (+)
htr1aa LOC106585208 coding upstream 658406 41771717 ~ 41773955 (+)
LOC118964870 NA coding upstream 675158 41754679 ~ 41757203 (+)
camsap1b LOC106585218 coding downstream 170694 42603308 ~ 42645904 (+)
LOC110525996 LOC106585219 coding downstream 213420 42646034 ~ 42655499 (+)
LOC118964872 NA coding downstream 346647 42779261 ~ 42780791 (+)
LOC110525999 LOC106585222 coding downstream 377700 42810314 ~ 42825158 (+)
LOC118965026 LOC106585222 coding downstream 397197 42829811 ~ 42836106 (+)
G509064 NA non-coding upstream 3765 42428305 ~ 42428596 (+)
G509062 NA non-coding upstream 10215 42421342 ~ 42422146 (+)
G509061 NA non-coding upstream 11178 42419592 ~ 42421183 (+)
G509060 NA non-coding upstream 13385 42418721 ~ 42418976 (+)
G508717 NA non-coding upstream 60168 42371964 ~ 42372193 (+)
G509070 NA non-coding downstream 3600 42436214 ~ 42436446 (+)
G509077 NA non-coding downstream 9752 42442366 ~ 42442584 (+)
G509078 NA non-coding downstream 10500 42443114 ~ 42443323 (+)
G509080 NA non-coding downstream 12616 42445230 ~ 42445437 (+)
G509148 NA non-coding downstream 115617 42548231 ~ 42549226 (+)
G508559 dph7 other upstream 300421 42129225 ~ 42131940 (+)
G507768 LOC105030512 other upstream 960953 41469551 ~ 41471408 (+)
fbxl17 fbxl17 other upstream 1572839 40568637 ~ 40886427 (+)
G506285 NA other upstream 1865932 40566067 ~ 40566429 (+)
G506281 LOC106585187 other upstream 1884848 40544863 ~ 40547513 (+)
G509160 NA other downstream 134491 42567105 ~ 42570169 (+)
G510416 NA other downstream 1224854 43657468 ~ 43658493 (+)
G512192 LOC106584908 other downstream 2751825 45184439 ~ 45185869 (+)
LOC110526028 ccdc60 other downstream 2785113 45187119 ~ 45236944 (+)
G512912 NA other downstream 3202975 45635589 ~ 45636250 (+)

Expression


Co-expression Network