Gene
RNA
| Item | Value |
|---|---|
| gene id | G509077 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 42442366 ~ 42442584 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU577847 | True | 219 | lncRNA | 0.36 | 1 | 42442366 | 42442584 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| stxbp1b | LOC106585214 | coding | upstream | 27258 | 42372531 ~ 42415108 (+) |
| LOC110525988 | LOC106584966 | coding | upstream | 193100 | 42244505 ~ 42249266 (+) |
| paxx | ci142 | coding | upstream | 298758 | 42137053 ~ 42143608 (+) |
| htr1aa | LOC106585208 | coding | upstream | 668411 | 41771717 ~ 41773955 (+) |
| LOC118964870 | NA | coding | upstream | 685163 | 41754679 ~ 41757203 (+) |
| camsap1b | LOC106585218 | coding | downstream | 160724 | 42603308 ~ 42645904 (+) |
| LOC110525996 | LOC106585219 | coding | downstream | 203450 | 42646034 ~ 42655499 (+) |
| LOC118964872 | NA | coding | downstream | 336677 | 42779261 ~ 42780791 (+) |
| LOC110525999 | LOC106585222 | coding | downstream | 367730 | 42810314 ~ 42825158 (+) |
| LOC118965026 | LOC106585222 | coding | downstream | 387227 | 42829811 ~ 42836106 (+) |
| G509070 | NA | non-coding | upstream | 5920 | 42436214 ~ 42436446 (+) |
| G509068 | NA | non-coding | upstream | 9752 | 42432361 ~ 42432614 (+) |
| G509064 | NA | non-coding | upstream | 13770 | 42428305 ~ 42428596 (+) |
| G509062 | NA | non-coding | upstream | 20220 | 42421342 ~ 42422146 (+) |
| G509061 | NA | non-coding | upstream | 21183 | 42419592 ~ 42421183 (+) |
| G509078 | NA | non-coding | downstream | 530 | 42443114 ~ 42443323 (+) |
| G509080 | NA | non-coding | downstream | 2646 | 42445230 ~ 42445437 (+) |
| G509148 | NA | non-coding | downstream | 105647 | 42548231 ~ 42549226 (+) |
| G509161 | NA | non-coding | downstream | 127975 | 42570559 ~ 42573399 (+) |
| G509163 | NA | non-coding | downstream | 133969 | 42576553 ~ 42576898 (+) |
| G508559 | dph7 | other | upstream | 310426 | 42129225 ~ 42131940 (+) |
| G507768 | LOC105030512 | other | upstream | 970958 | 41469551 ~ 41471408 (+) |
| fbxl17 | fbxl17 | other | upstream | 1582844 | 40568637 ~ 40886427 (+) |
| G506285 | NA | other | upstream | 1875937 | 40566067 ~ 40566429 (+) |
| G506281 | LOC106585187 | other | upstream | 1894853 | 40544863 ~ 40547513 (+) |
| G509160 | NA | other | downstream | 124521 | 42567105 ~ 42570169 (+) |
| G510416 | NA | other | downstream | 1214884 | 43657468 ~ 43658493 (+) |
| G512192 | LOC106584908 | other | downstream | 2741855 | 45184439 ~ 45185869 (+) |
| LOC110526028 | ccdc60 | other | downstream | 2775143 | 45187119 ~ 45236944 (+) |
| G512912 | NA | other | downstream | 3193005 | 45635589 ~ 45636250 (+) |
