G509078


Basic Information

Item Value
gene id G509078
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 42443114 ~ 42443323 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU577848
tgtcaacgttgtgaacaaagtTCCCCATGGTGGCGACGGGGTTAtaatatgggcaggcataagctacggacaacaaacacaaatgcattttatcaatggaaatttgaatgcacagagataccatgatgagatcctgaggcccactgtgaggcccatttttgtaaggtatctgtgaccaacagttgCATATCTGtactcccagtcatgtga

Function

NR:

description
hypothetical protein EH28_01411

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU577848 True 210 lncRNA 0.44 1 42443114 42443323

Neighbor

gene id symbol gene type direction distance location
stxbp1b LOC106585214 coding upstream 28006 42372531 ~ 42415108 (+)
LOC110525988 LOC106584966 coding upstream 193848 42244505 ~ 42249266 (+)
paxx ci142 coding upstream 299506 42137053 ~ 42143608 (+)
htr1aa LOC106585208 coding upstream 669159 41771717 ~ 41773955 (+)
LOC118964870 NA coding upstream 685911 41754679 ~ 41757203 (+)
camsap1b LOC106585218 coding downstream 159985 42603308 ~ 42645904 (+)
LOC110525996 LOC106585219 coding downstream 202711 42646034 ~ 42655499 (+)
LOC118964872 NA coding downstream 335938 42779261 ~ 42780791 (+)
LOC110525999 LOC106585222 coding downstream 366991 42810314 ~ 42825158 (+)
LOC118965026 LOC106585222 coding downstream 386488 42829811 ~ 42836106 (+)
G509077 NA non-coding upstream 530 42442366 ~ 42442584 (+)
G509070 NA non-coding upstream 6668 42436214 ~ 42436446 (+)
G509068 NA non-coding upstream 10500 42432361 ~ 42432614 (+)
G509064 NA non-coding upstream 14518 42428305 ~ 42428596 (+)
G509062 NA non-coding upstream 20968 42421342 ~ 42422146 (+)
G509080 NA non-coding downstream 1907 42445230 ~ 42445437 (+)
G509148 NA non-coding downstream 104908 42548231 ~ 42549226 (+)
G509161 NA non-coding downstream 127236 42570559 ~ 42573399 (+)
G509163 NA non-coding downstream 133230 42576553 ~ 42576898 (+)
G509164 NA non-coding downstream 134896 42578219 ~ 42588368 (+)
G508559 dph7 other upstream 311174 42129225 ~ 42131940 (+)
G507768 LOC105030512 other upstream 971706 41469551 ~ 41471408 (+)
fbxl17 fbxl17 other upstream 1583592 40568637 ~ 40886427 (+)
G506285 NA other upstream 1876685 40566067 ~ 40566429 (+)
G506281 LOC106585187 other upstream 1895601 40544863 ~ 40547513 (+)
G509160 NA other downstream 123782 42567105 ~ 42570169 (+)
G510416 NA other downstream 1214145 43657468 ~ 43658493 (+)
G512192 LOC106584908 other downstream 2741116 45184439 ~ 45185869 (+)
LOC110526028 ccdc60 other downstream 2774404 45187119 ~ 45236944 (+)
G512912 NA other downstream 3192266 45635589 ~ 45636250 (+)

Expression


Co-expression Network