Gene
RNA
| Item | Value |
|---|---|
| gene id | G509148 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 42548231 ~ 42549226 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| NADPH oxidase activator 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU577924 | True | 428 | lncRNA | 0.52 | 2 | 42548231 | 42549226 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| stxbp1b | LOC106585214 | coding | upstream | 133123 | 42372531 ~ 42415108 (+) |
| LOC110525988 | LOC106584966 | coding | upstream | 298965 | 42244505 ~ 42249266 (+) |
| paxx | ci142 | coding | upstream | 404623 | 42137053 ~ 42143608 (+) |
| htr1aa | LOC106585208 | coding | upstream | 774276 | 41771717 ~ 41773955 (+) |
| LOC118964870 | NA | coding | upstream | 791028 | 41754679 ~ 41757203 (+) |
| camsap1b | LOC106585218 | coding | downstream | 54082 | 42603308 ~ 42645904 (+) |
| LOC110525996 | LOC106585219 | coding | downstream | 96808 | 42646034 ~ 42655499 (+) |
| LOC118964872 | NA | coding | downstream | 230035 | 42779261 ~ 42780791 (+) |
| LOC110525999 | LOC106585222 | coding | downstream | 261088 | 42810314 ~ 42825158 (+) |
| LOC118965026 | LOC106585222 | coding | downstream | 280585 | 42829811 ~ 42836106 (+) |
| G509080 | NA | non-coding | upstream | 102794 | 42445230 ~ 42445437 (+) |
| G509078 | NA | non-coding | upstream | 104908 | 42443114 ~ 42443323 (+) |
| G509077 | NA | non-coding | upstream | 105647 | 42442366 ~ 42442584 (+) |
| G509070 | NA | non-coding | upstream | 111785 | 42436214 ~ 42436446 (+) |
| G509068 | NA | non-coding | upstream | 115617 | 42432361 ~ 42432614 (+) |
| G509161 | NA | non-coding | downstream | 21333 | 42570559 ~ 42573399 (+) |
| G509163 | NA | non-coding | downstream | 27327 | 42576553 ~ 42576898 (+) |
| G509164 | NA | non-coding | downstream | 28993 | 42578219 ~ 42588368 (+) |
| G509252 | NA | non-coding | downstream | 180694 | 42729920 ~ 42730149 (+) |
| G508559 | dph7 | other | upstream | 416291 | 42129225 ~ 42131940 (+) |
| G507768 | LOC105030512 | other | upstream | 1076823 | 41469551 ~ 41471408 (+) |
| fbxl17 | fbxl17 | other | upstream | 1688709 | 40568637 ~ 40886427 (+) |
| G506285 | NA | other | upstream | 1981802 | 40566067 ~ 40566429 (+) |
| G506281 | LOC106585187 | other | upstream | 2000718 | 40544863 ~ 40547513 (+) |
| G509160 | NA | other | downstream | 17879 | 42567105 ~ 42570169 (+) |
| G510416 | NA | other | downstream | 1108242 | 43657468 ~ 43658493 (+) |
| G512192 | LOC106584908 | other | downstream | 2635213 | 45184439 ~ 45185869 (+) |
| LOC110526028 | ccdc60 | other | downstream | 2668501 | 45187119 ~ 45236944 (+) |
| G512912 | NA | other | downstream | 3086363 | 45635589 ~ 45636250 (+) |
