G509500


Basic Information

Item Value
gene id G509500
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 42766120 ~ 42766348 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU578299
caaaagtactagttacgctttgaatgcttagcaggacagaaaattgtccaattcacatacttatcaagagaacatccatggtcatccctaatgtctctgatctggcggactcactaaacaccaatgttttgtttgtaaattatgtctgagtgttggagtgtgtccctggctatctgtaaataaaaaaaaaacaagaaaattgtgccatctcgtttgcttaatataagga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU578299 True 229 lncRNA 0.37 1 42766120 42766348

Neighbor

gene id symbol gene type direction distance location
LOC110525996 LOC106585219 coding upstream 114392 42646034 ~ 42655499 (+)
camsap1b LOC106585218 coding upstream 120216 42603308 ~ 42645904 (+)
stxbp1b LOC106585214 coding upstream 351012 42372531 ~ 42415108 (+)
LOC110525988 LOC106584966 coding upstream 516854 42244505 ~ 42249266 (+)
paxx ci142 coding upstream 622512 42137053 ~ 42143608 (+)
LOC118964872 NA coding downstream 12913 42779261 ~ 42780791 (+)
LOC110525999 LOC106585222 coding downstream 43966 42810314 ~ 42825158 (+)
LOC118965026 LOC106585222 coding downstream 63463 42829811 ~ 42836106 (+)
col27a1b LOC106585224 coding downstream 87439 42853787 ~ 42992257 (+)
LOC118965079 NA coding downstream 257515 43023780 ~ 43024698 (+)
G509272 NA non-coding upstream 9149 42756766 ~ 42756971 (+)
G509267 NA non-coding upstream 14506 42751408 ~ 42751614 (+)
G509266 NA non-coding upstream 15852 42750031 ~ 42750268 (+)
G509260 NA non-coding upstream 22907 42742014 ~ 42743213 (+)
G509256 NA non-coding upstream 31263 42734594 ~ 42734857 (+)
G509697 NA non-coding downstream 204208 42970556 ~ 42970917 (+)
G509700 NA non-coding downstream 207426 42973774 ~ 42974022 (+)
G509719 NA non-coding downstream 235384 43001732 ~ 43002009 (+)
G509160 NA other upstream 195951 42567105 ~ 42570169 (+)
G508559 dph7 other upstream 634180 42129225 ~ 42131940 (+)
G507768 LOC105030512 other upstream 1294712 41469551 ~ 41471408 (+)
fbxl17 fbxl17 other upstream 1906598 40568637 ~ 40886427 (+)
G506285 NA other upstream 2199691 40566067 ~ 40566429 (+)
G510416 NA other downstream 891120 43657468 ~ 43658493 (+)
G512192 LOC106584908 other downstream 2418091 45184439 ~ 45185869 (+)
LOC110526028 ccdc60 other downstream 2451379 45187119 ~ 45236944 (+)
G512912 NA other downstream 2869241 45635589 ~ 45636250 (+)
LOC110526042 LOC106584891 other downstream 3420652 46076084 ~ 46190292 (+)

Expression


Co-expression Network