G509700


Basic Information

Item Value
gene id G509700
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 42973774 ~ 42974022 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU578504
GAGAAGCACAAGGAGGTTTCATATCCATCTGAGCCAAGCTGCTGGATAGTAAGTGTTGTGTTGTGCatgaacacacgcacgcacacacacacacatacagaagctCTTGCTCGCACACACGCGCATCATCATCCTCTCTCCAGCAATCGACATATTACCAATTGTCAGTCAAACGATGCAGGACAACTCTACTATGAGTGCAGTGGCTTAATGCCTTAAAACTCACAGATGCACGTCTGCACCAtattc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU578504 True 249 lncRNA 0.47 1 42973774 42974022

Neighbor

gene id symbol gene type direction distance location
LOC118965026 LOC106585222 coding upstream 137668 42829811 ~ 42836106 (+)
LOC110525999 LOC106585222 coding upstream 148616 42810314 ~ 42825158 (+)
LOC118964872 NA coding upstream 192983 42779261 ~ 42780791 (+)
LOC110525996 LOC106585219 coding upstream 322046 42646034 ~ 42655499 (+)
camsap1b LOC106585218 coding upstream 327870 42603308 ~ 42645904 (+)
LOC118965079 NA coding downstream 49841 43023780 ~ 43024698 (+)
LOC110526005 LOC106585229 coding downstream 982155 43937835 ~ 43981885 (+)
LOC118964874 NA coding downstream 1018811 43992833 ~ 43995155 (+)
LOC110526008 NA coding downstream 1285074 44259096 ~ 44260124 (+)
LOC110526009 LOC106585233 coding downstream 1310830 44284852 ~ 44295238 (+)
G509697 NA non-coding upstream 2857 42970556 ~ 42970917 (+)
G509500 NA non-coding upstream 207426 42766120 ~ 42766348 (+)
G509272 NA non-coding upstream 216803 42756766 ~ 42756971 (+)
G509267 NA non-coding upstream 222160 42751408 ~ 42751614 (+)
G509266 NA non-coding upstream 223506 42750031 ~ 42750268 (+)
col27a1b LOC106585224 non-coding downstream 17273 42853787 ~ 42992257 (+)
G509719 NA non-coding downstream 27710 43001732 ~ 43002009 (+)
G509734 NA non-coding downstream 52145 43026167 ~ 43026443 (+)
G509736 NA non-coding downstream 54507 43028529 ~ 43028728 (+)
G509160 NA other upstream 403605 42567105 ~ 42570169 (+)
G508559 dph7 other upstream 841834 42129225 ~ 42131940 (+)
G507768 LOC105030512 other upstream 1502366 41469551 ~ 41471408 (+)
fbxl17 fbxl17 other upstream 2114252 40568637 ~ 40886427 (+)
G506285 NA other upstream 2407345 40566067 ~ 40566429 (+)
G510416 NA other downstream 683446 43657468 ~ 43658493 (+)
G512192 LOC106584908 other downstream 2210417 45184439 ~ 45185869 (+)
LOC110526028 ccdc60 other downstream 2243705 45187119 ~ 45236944 (+)
G512912 NA other downstream 2661567 45635589 ~ 45636250 (+)
LOC110526042 LOC106584891 other downstream 3212978 46076084 ~ 46190292 (+)

Expression


Co-expression Network