G509719


Basic Information

Item Value
gene id G509719
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 43001732 ~ 43002009 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU578523
gccctgttcctgctcctcgcactcgccctgaggtgcgtgtccccagcctggtaccaccagtgccggcaccacgcaccaggcctacagtgcggcTCGGCAGTACAGAGCGTctggtgacagtacccagtccggggcctccggcgacgggccacagtccggggcctccggcgacgggccacagtccggggcCTCCGGCGATGGGCCACGGGTCAGTGCTACAAGAGCAGACTTAGGGTAAAGAAGGGGGGCGGCGTCCAGacccagagccgccaccgagg

Function

NR:

description
gamma-2-syntrophin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU578523 True 278 lncRNA 0.70 1 43001732 43002009

Neighbor

gene id symbol gene type direction distance location
col27a1b LOC106585224 coding upstream 9501 42853787 ~ 42992257 (+)
LOC118965026 LOC106585222 coding upstream 165626 42829811 ~ 42836106 (+)
LOC110525999 LOC106585222 coding upstream 176574 42810314 ~ 42825158 (+)
LOC118964872 NA coding upstream 220941 42779261 ~ 42780791 (+)
LOC110525996 LOC106585219 coding upstream 350004 42646034 ~ 42655499 (+)
LOC118965079 NA coding downstream 21854 43023780 ~ 43024698 (+)
LOC110526005 LOC106585229 coding downstream 954168 43937835 ~ 43981885 (+)
LOC118964874 NA coding downstream 990824 43992833 ~ 43995155 (+)
LOC110526008 NA coding downstream 1257087 44259096 ~ 44260124 (+)
LOC110526009 LOC106585233 coding downstream 1282843 44284852 ~ 44295238 (+)
G509700 NA non-coding upstream 27710 42973774 ~ 42974022 (+)
G509697 NA non-coding upstream 30815 42970556 ~ 42970917 (+)
G509500 NA non-coding upstream 235384 42766120 ~ 42766348 (+)
G509272 NA non-coding upstream 244761 42756766 ~ 42756971 (+)
G509734 NA non-coding downstream 24158 43026167 ~ 43026443 (+)
G509736 NA non-coding downstream 26520 43028529 ~ 43028728 (+)
G509740 NA non-coding downstream 35028 43037037 ~ 43042996 (+)
G509741 NA non-coding downstream 38899 43040908 ~ 43046262 (+)
G509160 NA other upstream 431563 42567105 ~ 42570169 (+)
G508559 dph7 other upstream 869792 42129225 ~ 42131940 (+)
G507768 LOC105030512 other upstream 1530324 41469551 ~ 41471408 (+)
fbxl17 fbxl17 other upstream 2142210 40568637 ~ 40886427 (+)
G506285 NA other upstream 2435303 40566067 ~ 40566429 (+)
G510416 NA other downstream 655459 43657468 ~ 43658493 (+)
G512192 LOC106584908 other downstream 2182430 45184439 ~ 45185869 (+)
LOC110526028 ccdc60 other downstream 2215718 45187119 ~ 45236944 (+)
G512912 NA other downstream 2633580 45635589 ~ 45636250 (+)
LOC110526042 LOC106584891 other downstream 3184991 46076084 ~ 46190292 (+)

Expression


Co-expression Network