G509923


Basic Information

Item Value
gene id G509923
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 43093743 ~ 43094013 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU578737
cagcaaggtttatacaaatctccgtggttgaaaactaaatgttagtctaaaagaaatgtgagataatgtctagatgcttttaatagtggagatcaagtttataaattgcctgtttgggctgatgagacagtggattttgcagtcagatggaacagagtaaataggcattttaatgtcatagatttagccagtggtaacttgtggtatagacaccagctggaatgcggtgttaaccaatcagcattcagaattagacccacccgttgtataa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU578737 True 271 lncRNA 0.38 1 43093743 43094013

Neighbor

gene id symbol gene type direction distance location
LOC118965079 NA coding upstream 69045 43023780 ~ 43024698 (+)
col27a1b LOC106585224 coding upstream 101512 42853787 ~ 42992257 (+)
LOC118965026 LOC106585222 coding upstream 257637 42829811 ~ 42836106 (+)
LOC110525999 LOC106585222 coding upstream 268585 42810314 ~ 42825158 (+)
LOC118964872 NA coding upstream 312952 42779261 ~ 42780791 (+)
LOC110526005 LOC106585229 coding downstream 862164 43937835 ~ 43981885 (+)
LOC118964874 NA coding downstream 898820 43992833 ~ 43995155 (+)
LOC110526008 NA coding downstream 1165083 44259096 ~ 44260124 (+)
LOC110526009 LOC106585233 coding downstream 1190839 44284852 ~ 44295238 (+)
LOC110526012 LOC106585234 coding downstream 1201601 44295614 ~ 44309360 (+)
G509922 NA non-coding upstream 268 43093248 ~ 43093475 (+)
G509763 NA non-coding upstream 19010 43074094 ~ 43074733 (+)
G509741 NA non-coding upstream 47481 43040908 ~ 43046262 (+)
G509740 NA non-coding upstream 50747 43037037 ~ 43042996 (+)
G509736 NA non-coding upstream 65015 43028529 ~ 43028728 (+)
G509924 NA non-coding downstream 208 43094221 ~ 43094515 (+)
G509930 NA non-coding downstream 14192 43108205 ~ 43108491 (+)
G509931 NA non-coding downstream 14762 43108775 ~ 43112219 (+)
G509948 LOC106578716 non-coding downstream 28492 43122505 ~ 43123620 (+)
G509968 NA non-coding downstream 45597 43139610 ~ 43139843 (+)
G509160 NA other upstream 523574 42567105 ~ 42570169 (+)
G508559 dph7 other upstream 961803 42129225 ~ 42131940 (+)
G507768 LOC105030512 other upstream 1622335 41469551 ~ 41471408 (+)
fbxl17 fbxl17 other upstream 2234221 40568637 ~ 40886427 (+)
G506285 NA other upstream 2527314 40566067 ~ 40566429 (+)
G510416 NA other downstream 563455 43657468 ~ 43658493 (+)
G512192 LOC106584908 other downstream 2090426 45184439 ~ 45185869 (+)
LOC110526028 ccdc60 other downstream 2123714 45187119 ~ 45236944 (+)
G512912 NA other downstream 2541576 45635589 ~ 45636250 (+)
LOC110526042 LOC106584891 other downstream 3092987 46076084 ~ 46190292 (+)

Expression


Co-expression Network