G509997


Basic Information

Item Value
gene id G509997
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 43157483 ~ 43157770 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU578814
atctaaatctaccaattatatgcatatcctagcttctgggcctgagtagcaggcagtttactttgggcatgcttttcatctggacgtgaaaatactgccccctagctcAAAGAGTTAAACAACTTCTTCCATGGTGCCCCAAATCCTATTGAATTAATTgctacatgattagtttaatcaggagaaagttacctctcgttcaatggcttttctacagacaaagaaattctccggttgggaTATTATTGAAcgtttatgataaaaacatcctaaagattgctTCTATAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU578814 True 288 lncRNA 0.38 1 43157483 43157770

Neighbor

gene id symbol gene type direction distance location
LOC118965079 NA coding upstream 132785 43023780 ~ 43024698 (+)
col27a1b LOC106585224 coding upstream 165252 42853787 ~ 42992257 (+)
LOC118965026 LOC106585222 coding upstream 321377 42829811 ~ 42836106 (+)
LOC110525999 LOC106585222 coding upstream 332325 42810314 ~ 42825158 (+)
LOC118964872 NA coding upstream 376692 42779261 ~ 42780791 (+)
LOC110526005 LOC106585229 coding downstream 798407 43937835 ~ 43981885 (+)
LOC118964874 NA coding downstream 835063 43992833 ~ 43995155 (+)
LOC110526008 NA coding downstream 1101326 44259096 ~ 44260124 (+)
LOC110526009 LOC106585233 coding downstream 1127082 44284852 ~ 44295238 (+)
LOC110526012 LOC106585234 coding downstream 1137844 44295614 ~ 44309360 (+)
G509996 NA non-coding upstream 624 43156628 ~ 43156859 (+)
G509985 NA non-coding upstream 7013 43150210 ~ 43150470 (+)
G509975 NA non-coding upstream 14118 43143129 ~ 43143365 (+)
G509971 NA non-coding upstream 15582 43141608 ~ 43141901 (+)
G509968 NA non-coding upstream 17640 43139610 ~ 43139843 (+)
G510011 NA non-coding downstream 33127 43190897 ~ 43191295 (+)
G510013 NA non-coding downstream 36660 43194430 ~ 43194651 (+)
G510014 NA non-coding downstream 37383 43195153 ~ 43200236 (+)
G510033 NA non-coding downstream 54200 43211970 ~ 43212242 (+)
G510054 NA non-coding downstream 69007 43226777 ~ 43227067 (+)
G509160 NA other upstream 587314 42567105 ~ 42570169 (+)
G508559 dph7 other upstream 1025543 42129225 ~ 42131940 (+)
G507768 LOC105030512 other upstream 1686075 41469551 ~ 41471408 (+)
fbxl17 fbxl17 other upstream 2297961 40568637 ~ 40886427 (+)
G506285 NA other upstream 2591054 40566067 ~ 40566429 (+)
G510416 NA other downstream 499698 43657468 ~ 43658493 (+)
G512192 LOC106584908 other downstream 2026669 45184439 ~ 45185869 (+)
LOC110526028 ccdc60 other downstream 2059957 45187119 ~ 45236944 (+)
G512912 NA other downstream 2477819 45635589 ~ 45636250 (+)
LOC110526042 LOC106584891 other downstream 3029230 46076084 ~ 46190292 (+)

Expression


Co-expression Network