G510032


Basic Information

Item Value
gene id G510032
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 43209268 ~ 43210135 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU578850
ccccttaagttaatactttgtagagccaccttttgctgtgattacagctgtaagtcgcttggggtatgtctctatcagttttgcacatcgagagactgaaattttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaactcctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagagaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctgaagaaaagcaggcccaaaccatgatactgccaccaccatgtttgacagtggggatggtgtgttcagggtgatgagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaatttcaattttggtttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtgacaaactttaaacgacactttttatggatatctttcagaaatggctttcttcttgccactcttccataaaggccagatttgtgcaatatacgactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctccttgtatgagctgaaaatttagagggacggccaggtcttagg

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU578850 True 868 lncRNA 0.44 1 43209268 43210135

Neighbor

gene id symbol gene type direction distance location
LOC110526002 LOC106585226 coding downstream 190749 43005570 ~ 43018519 (-)
zgc:101858 LOC106585225 coding downstream 211410 42992049 ~ 42997858 (-)
LOC110525998 LOC106585223 coding downstream 420780 42766320 ~ 42788488 (-)
LOC110525997 LOC106585221 coding downstream 479674 42654984 ~ 42729594 (-)
LOC110525994 LOC106585220 coding downstream 621982 42576529 ~ 42587286 (-)
LOC110526003 LOC106585228 coding upstream 479169 43689304 ~ 43813410 (-)
prodhb LOC100194675 coding upstream 730655 43940790 ~ 43955257 (-)
LOC110526006 LOC106584969 coding upstream 834911 44045046 ~ 44099131 (-)
nf2a nf2 coding upstream 1000715 44209338 ~ 44272386 (-)
fbxw8 fbxw8 coding upstream 1099759 44309894 ~ 44345449 (-)
G510012 NA non-coding downstream 17973 43190979 ~ 43191295 (-)
G509993 NA non-coding downstream 54803 43154259 ~ 43154465 (-)
G509989 NA non-coding downstream 56979 43151987 ~ 43152289 (-)
G509976 NA non-coding downstream 65787 43143256 ~ 43143481 (-)
G509974 NA non-coding downstream 66379 43142679 ~ 43142889 (-)
G510036 NA non-coding upstream 3399 43213534 ~ 43213833 (-)
G510105 NA non-coding upstream 49063 43259198 ~ 43259773 (-)
G510115 NA non-coding upstream 167638 43377773 ~ 43378044 (-)
G510116 NA non-coding upstream 169591 43379726 ~ 43380231 (-)
G510118 NA non-coding upstream 173912 43384047 ~ 43389056 (-)
G509952 NA other downstream 83881 43124581 ~ 43125387 (-)
G509949 LOC106578716 other downstream 86176 43122546 ~ 43123092 (-)
G509902 NA other downstream 132111 43076692 ~ 43077157 (-)
G509432 NA other downstream 563399 42643519 ~ 42645869 (-)
G509034 LOC106585214 other downstream 806048 42372441 ~ 42403220 (-)
G510310 NA other upstream 313579 43523714 ~ 43524108 (-)
znrf3 LOC106584905 other upstream 2064503 45270568 ~ 45384850 (-)
apba1a apba1 other upstream 3149753 46263121 ~ 46360886 (-)

Expression


Co-expression Network