G510111


Basic Information

Item Value
gene id G510111
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 43262520 ~ 43263158 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU578930
CCCATGCTACCTTGACCACACGTCACTAGTGTGGGGTTACTCTCCTCAATTGAAggttgagtgagagagaaaaatggtTATCAGCTAAACCTGATTGTATTGTCCTTTCAGAGCATTTATCTATGTCCTGTTTTCTTCCACTTCAGGTGACGGATAGCCAAGTGAACAATTGTATCACAGATTTATCAAGTCCTCTGTCCGATCCACTGATGGGTGGTAGTCATACGATCCACTTTCGATAAACCATTTGTAGATGGGCTGCTGCAacatgaacacacagacacagggggTGTACTGAGGCCTACGGTAagagttcaacatttgcaaaacaatcagttttcataacttcataagtCTGAATATTCGTAATttttttgtccaaaatgaaaaggcatgctgtcgtacaaggttagtagctacattttacatcagatacatggtttccggatactcccgtaaagcctaTCTCATtggttatctagctagctttgtttgaccccgattggtgcttatttgagttAGAGTCGTTCAAGTTAGAGTCGTTCAAGTGAAGACCAGccgcgtcatcggcgtgccatgaaggggtcgctctctgaccacatatggtgttctataggatatactacacccctattgATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU578930 True 639 lncRNA 0.43 1 43262520 43263158

Neighbor

gene id symbol gene type direction distance location
LOC118965079 NA coding upstream 237822 43023780 ~ 43024698 (+)
col27a1b LOC106585224 coding upstream 270289 42853787 ~ 42992257 (+)
LOC118965026 LOC106585222 coding upstream 426414 42829811 ~ 42836106 (+)
LOC110525999 LOC106585222 coding upstream 437362 42810314 ~ 42825158 (+)
LOC118964872 NA coding upstream 481729 42779261 ~ 42780791 (+)
LOC110526005 LOC106585229 coding downstream 693019 43937835 ~ 43981885 (+)
LOC118964874 NA coding downstream 729675 43992833 ~ 43995155 (+)
LOC110526008 NA coding downstream 995938 44259096 ~ 44260124 (+)
LOC110526009 LOC106585233 coding downstream 1021694 44284852 ~ 44295238 (+)
LOC110526012 LOC106585234 coding downstream 1032456 44295614 ~ 44309360 (+)
G510104 NA non-coding upstream 2901 43259390 ~ 43259619 (+)
G510100 NA non-coding upstream 4864 43257368 ~ 43257656 (+)
G510054 NA non-coding upstream 35453 43226777 ~ 43227067 (+)
G510033 NA non-coding upstream 50278 43211970 ~ 43212242 (+)
G510014 NA non-coding upstream 62284 43195153 ~ 43200236 (+)
G510114 NA non-coding downstream 108460 43371618 ~ 43372105 (+)
G510128 NA non-coding downstream 130174 43393332 ~ 43393819 (+)
G510139 NA non-coding downstream 135821 43398979 ~ 43399713 (+)
G510150 NA non-coding downstream 141826 43404984 ~ 43405213 (+)
G510152 NA non-coding downstream 143288 43406446 ~ 43406796 (+)
G509160 NA other upstream 692351 42567105 ~ 42570169 (+)
G508559 dph7 other upstream 1130580 42129225 ~ 42131940 (+)
G507768 LOC105030512 other upstream 1791112 41469551 ~ 41471408 (+)
fbxl17 fbxl17 other upstream 2402998 40568637 ~ 40886427 (+)
G506285 NA other upstream 2696091 40566067 ~ 40566429 (+)
G510416 NA other downstream 394310 43657468 ~ 43658493 (+)
G512192 LOC106584908 other downstream 1921281 45184439 ~ 45185869 (+)
LOC110526028 ccdc60 other downstream 1954569 45187119 ~ 45236944 (+)
G512912 NA other downstream 2372431 45635589 ~ 45636250 (+)
LOC110526042 LOC106584891 other downstream 2923842 46076084 ~ 46190292 (+)

Expression


Co-expression Network