G510114


Basic Information

Item Value
gene id G510114
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 43371618 ~ 43372105 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU578933
AACAATTATGTCCCCCTTTCCAAGTTCTCATTGTGTAATCAACAAAGAGAGCACAGAGGTACATGGTGAATGAATAGTAGTCTAACAGTTTGCTGGTCAGAAAATAGTCTTCAAAATATGTCACGGAAGTTTCACGGTCGGTGTTTAAAAGCATCCTTAAATGATAGCATCATTAAACGATACGCATGCATTACGTAACTGAAATCCAGACAAAGTGTAATTCCCAAGTGAATGTATAGATTCGGTGCTACTTGAGTGTTTTGCTTGTGAAACGGGACACAAATGTTTGATATGAAGAACGTTTTTACTGTATGTGAATATATAAAACCTGTTCAGACCTCTGTGATGACATAACAATAAACTTATCATGCAAAActgtgtttttgttgtcctaTATTGGTGGGCTGCATTTCTTGGCTGCCTCCCCAAAAAAGTGAGCAACCGATGGAGAGTACCAGAAAATatgatctattgattctgttGCCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU578933 True 488 lncRNA 0.38 1 43371618 43372105

Neighbor

gene id symbol gene type direction distance location
LOC118965079 NA coding upstream 346920 43023780 ~ 43024698 (+)
col27a1b LOC106585224 coding upstream 379387 42853787 ~ 42992257 (+)
LOC118965026 LOC106585222 coding upstream 535512 42829811 ~ 42836106 (+)
LOC110525999 LOC106585222 coding upstream 546460 42810314 ~ 42825158 (+)
LOC118964872 NA coding upstream 590827 42779261 ~ 42780791 (+)
LOC110526005 LOC106585229 coding downstream 584072 43937835 ~ 43981885 (+)
LOC118964874 NA coding downstream 620728 43992833 ~ 43995155 (+)
LOC110526008 NA coding downstream 886991 44259096 ~ 44260124 (+)
LOC110526009 LOC106585233 coding downstream 912747 44284852 ~ 44295238 (+)
LOC110526012 LOC106585234 coding downstream 923509 44295614 ~ 44309360 (+)
G510111 NA non-coding upstream 108460 43262520 ~ 43263158 (+)
G510104 NA non-coding upstream 111999 43259390 ~ 43259619 (+)
G510100 NA non-coding upstream 113962 43257368 ~ 43257656 (+)
G510054 NA non-coding upstream 144551 43226777 ~ 43227067 (+)
G510033 NA non-coding upstream 159376 43211970 ~ 43212242 (+)
G510128 NA non-coding downstream 21227 43393332 ~ 43393819 (+)
G510139 NA non-coding downstream 26874 43398979 ~ 43399713 (+)
G510150 NA non-coding downstream 32879 43404984 ~ 43405213 (+)
G510152 NA non-coding downstream 34341 43406446 ~ 43406796 (+)
G510268 NA non-coding downstream 120044 43492149 ~ 43492352 (+)
G509160 NA other upstream 801449 42567105 ~ 42570169 (+)
G508559 dph7 other upstream 1239678 42129225 ~ 42131940 (+)
G507768 LOC105030512 other upstream 1900210 41469551 ~ 41471408 (+)
fbxl17 fbxl17 other upstream 2512096 40568637 ~ 40886427 (+)
G506285 NA other upstream 2805189 40566067 ~ 40566429 (+)
G510416 NA other downstream 285363 43657468 ~ 43658493 (+)
G512192 LOC106584908 other downstream 1812334 45184439 ~ 45185869 (+)
LOC110526028 ccdc60 other downstream 1845622 45187119 ~ 45236944 (+)
G512912 NA other downstream 2263484 45635589 ~ 45636250 (+)
LOC110526042 LOC106584891 other downstream 2814895 46076084 ~ 46190292 (+)

Expression


Co-expression Network