G510139


Basic Information

Item Value
gene id G510139
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 43398979 ~ 43399713 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU578960
ttatttcacctttatttaaccaggtaggcaagttgagaacaagttctcatttacaattgcgacctggccaagataaagcaaagcagttcgacacatacaacgacacagagttacacatggagtaaaacaaacatacagtcaataatacagtataaacaagtctatatacgatgtgagcaaattaggtgagataagggaggtaaaggcaaaaaggccatggtggcaaagtagatacaatatagcaagtaaaacactggaatggtagatttgcaatgggagaatgtgcaaagtagaaataaaaataatgggggtgcaaaggagcaaaataaataaataaataaaatacagtagggaaagaggtagttgtttgggctaaattataggtgggctatgtacaggtgcagtaatctgtgagctgctctgacagttggtgcttaaagctagtgagggagataagtgtttccagtttcagagatttttgtagttcgtttcagtcattggcagcagagaactggaaggagaggcggccaaagaaagaattggttttgggggtgactagagagatatacctgctggagcgtgtgctacaggtgggagatgcaatggtgaccagcgagctgagataaggggggactttacctagcagggtcttgtagatgacatggagccagtgggtttggcgacgagtatgaagcgagggccagccaacgagagcgtacaggttgcaatggtggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU578960 True 735 lncRNA 0.43 1 43398979 43399713

Neighbor

gene id symbol gene type direction distance location
LOC118965079 NA coding upstream 374281 43023780 ~ 43024698 (+)
col27a1b LOC106585224 coding upstream 406748 42853787 ~ 42992257 (+)
LOC118965026 LOC106585222 coding upstream 562873 42829811 ~ 42836106 (+)
LOC110525999 LOC106585222 coding upstream 573821 42810314 ~ 42825158 (+)
LOC118964872 NA coding upstream 618188 42779261 ~ 42780791 (+)
LOC110526005 LOC106585229 coding downstream 556464 43937835 ~ 43981885 (+)
LOC118964874 NA coding downstream 593120 43992833 ~ 43995155 (+)
LOC110526008 NA coding downstream 859383 44259096 ~ 44260124 (+)
LOC110526009 LOC106585233 coding downstream 885139 44284852 ~ 44295238 (+)
LOC110526012 LOC106585234 coding downstream 895901 44295614 ~ 44309360 (+)
G510128 NA non-coding upstream 5160 43393332 ~ 43393819 (+)
G510114 NA non-coding upstream 26874 43371618 ~ 43372105 (+)
G510111 NA non-coding upstream 135821 43262520 ~ 43263158 (+)
G510104 NA non-coding upstream 139360 43259390 ~ 43259619 (+)
G510100 NA non-coding upstream 141323 43257368 ~ 43257656 (+)
G510150 NA non-coding downstream 5271 43404984 ~ 43405213 (+)
G510152 NA non-coding downstream 6733 43406446 ~ 43406796 (+)
G510268 NA non-coding downstream 92436 43492149 ~ 43492352 (+)
G510308 NA non-coding downstream 121935 43521648 ~ 43522123 (+)
G510311 NA non-coding downstream 124910 43524623 ~ 43524849 (+)
G509160 NA other upstream 828810 42567105 ~ 42570169 (+)
G508559 dph7 other upstream 1267039 42129225 ~ 42131940 (+)
G507768 LOC105030512 other upstream 1927571 41469551 ~ 41471408 (+)
fbxl17 fbxl17 other upstream 2539457 40568637 ~ 40886427 (+)
G506285 NA other upstream 2832550 40566067 ~ 40566429 (+)
G510416 NA other downstream 257755 43657468 ~ 43658493 (+)
G512192 LOC106584908 other downstream 1784726 45184439 ~ 45185869 (+)
LOC110526028 ccdc60 other downstream 1818014 45187119 ~ 45236944 (+)
G512912 NA other downstream 2235876 45635589 ~ 45636250 (+)
LOC110526042 LOC106584891 other downstream 2787287 46076084 ~ 46190292 (+)

Expression


Co-expression Network