G510152


Basic Information

Item Value
gene id G510152
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 43406446 ~ 43406796 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU578973
tgatgatgagcttggagggtactataatgttgaaggctgagctgtagtcattgaacagcgttctcacataggtattcctcttgtccagatgggataaggcagtgtgcagtgcgatggcaattgcatcgtctgtggatctattggggcggtatgcaaattgaagtgggtctaggcggtcaggtaaggtggaggtgatatgatccttaactagcctctcaaagcactttatgatgacagaagtgagtgctacggggcaatagtcatttagttaggttacctttgctttcttggggacaggaacaatggtggacatcttgaagcaagtggggacagcagggatagggagagatt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU578973 True 351 lncRNA 0.47 1 43406446 43406796

Neighbor

gene id symbol gene type direction distance location
LOC118965079 NA coding upstream 381748 43023780 ~ 43024698 (+)
col27a1b LOC106585224 coding upstream 414215 42853787 ~ 42992257 (+)
LOC118965026 LOC106585222 coding upstream 570340 42829811 ~ 42836106 (+)
LOC110525999 LOC106585222 coding upstream 581288 42810314 ~ 42825158 (+)
LOC118964872 NA coding upstream 625655 42779261 ~ 42780791 (+)
LOC110526005 LOC106585229 coding downstream 549381 43937835 ~ 43981885 (+)
LOC118964874 NA coding downstream 586037 43992833 ~ 43995155 (+)
LOC110526008 NA coding downstream 852300 44259096 ~ 44260124 (+)
LOC110526009 LOC106585233 coding downstream 878056 44284852 ~ 44295238 (+)
LOC110526012 LOC106585234 coding downstream 888818 44295614 ~ 44309360 (+)
G510150 NA non-coding upstream 1233 43404984 ~ 43405213 (+)
G510139 NA non-coding upstream 6733 43398979 ~ 43399713 (+)
G510128 NA non-coding upstream 12627 43393332 ~ 43393819 (+)
G510114 NA non-coding upstream 34341 43371618 ~ 43372105 (+)
G510111 NA non-coding upstream 143288 43262520 ~ 43263158 (+)
G510268 NA non-coding downstream 85353 43492149 ~ 43492352 (+)
G510308 NA non-coding downstream 114852 43521648 ~ 43522123 (+)
G510311 NA non-coding downstream 117827 43524623 ~ 43524849 (+)
G510324 NA non-coding downstream 128045 43534841 ~ 43535151 (+)
G509160 NA other upstream 836277 42567105 ~ 42570169 (+)
G508559 dph7 other upstream 1274506 42129225 ~ 42131940 (+)
G507768 LOC105030512 other upstream 1935038 41469551 ~ 41471408 (+)
fbxl17 fbxl17 other upstream 2546924 40568637 ~ 40886427 (+)
G506285 NA other upstream 2840017 40566067 ~ 40566429 (+)
G510416 NA other downstream 250672 43657468 ~ 43658493 (+)
G512192 LOC106584908 other downstream 1777643 45184439 ~ 45185869 (+)
LOC110526028 ccdc60 other downstream 1810931 45187119 ~ 45236944 (+)
G512912 NA other downstream 2228793 45635589 ~ 45636250 (+)
LOC110526042 LOC106584891 other downstream 2780204 46076084 ~ 46190292 (+)

Expression


Co-expression Network