G510932


Basic Information

Item Value
gene id G510932
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 43989952 ~ 43990487 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU579782
ggaccaaaatgcagcgtggttgttattcatgttttttaattaagaaaactatacatgaataaactaacaaaacaataaatgtgagaaaacctaaacagcctatctggtgacaacaaacacaaagacaggaacaatcacccacgaaacactcaaagaatatggctgcctaaatatggttcccaatcagagacaacgataaacacctgcctctgattgagaaccaatacctaacaaaaaccccaagacaaaacacaccacacacaaaacccatgtcacaccctggcctgaccaaattaataaagaaaacacaaaatactaagaccaggacATGACAATAGGTGTCtatttagactgtaaactctccttccagactcatattaaacatctaaatccaaaattaaatctagaatcagcttcctagaatcagcttcctagaAAGCATCcttcatccttcactcatgctgccaacaataccctcgtaaaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU579782 True 485 lncRNA 0.38 2 43989952 43990487

Neighbor

gene id symbol gene type direction distance location
LOC110526005 LOC106585229 coding upstream 8067 43937835 ~ 43981885 (+)
LOC118965079 NA coding upstream 965254 43023780 ~ 43024698 (+)
col27a1b LOC106585224 coding upstream 997721 42853787 ~ 42992257 (+)
LOC118965026 LOC106585222 coding upstream 1153846 42829811 ~ 42836106 (+)
LOC110525999 LOC106585222 coding upstream 1164794 42810314 ~ 42825158 (+)
LOC118964874 NA coding downstream 2346 43992833 ~ 43995155 (+)
LOC110526008 NA coding downstream 268609 44259096 ~ 44260124 (+)
LOC110526009 LOC106585233 coding downstream 294365 44284852 ~ 44295238 (+)
LOC110526012 LOC106585234 coding downstream 305127 44295614 ~ 44309360 (+)
LOC110526014 NA coding downstream 347239 44337537 ~ 44339789 (+)
G510324 NA non-coding upstream 454801 43534841 ~ 43535151 (+)
G510311 NA non-coding upstream 465103 43524623 ~ 43524849 (+)
G510308 NA non-coding upstream 467829 43521648 ~ 43522123 (+)
G510268 NA non-coding upstream 497600 43492149 ~ 43492352 (+)
G510946 NA non-coding downstream 8296 43998783 ~ 43998991 (+)
G510950 NA non-coding downstream 11406 44001893 ~ 44002194 (+)
G510986 NA non-coding downstream 39203 44029690 ~ 44029918 (+)
G511030 NA non-coding downstream 99639 44090126 ~ 44090455 (+)
G510416 NA other upstream 331459 43657468 ~ 43658493 (+)
G509160 NA other upstream 1419783 42567105 ~ 42570169 (+)
G508559 dph7 other upstream 1858012 42129225 ~ 42131940 (+)
G507768 LOC105030512 other upstream 2518544 41469551 ~ 41471408 (+)
fbxl17 fbxl17 other upstream 3130430 40568637 ~ 40886427 (+)
G512192 LOC106584908 other downstream 1193952 45184439 ~ 45185869 (+)
LOC110526028 ccdc60 other downstream 1227240 45187119 ~ 45236944 (+)
G512912 NA other downstream 1645102 45635589 ~ 45636250 (+)
LOC110526042 LOC106584891 other downstream 2196513 46076084 ~ 46190292 (+)
G513501 NA other downstream 2369469 46359956 ~ 46360585 (+)

Expression


Co-expression Network