G511030


Basic Information

Item Value
gene id G511030
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 44090126 ~ 44090455 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU579881
caaagtgccacggcagctgttccgcccgaggacccgtgttagaccacaccattacgcttctcgcctgatacgagaagaacacccgcaggaggtaaccggacgggtgtatcactggatgagcaagctccgttaacaagaaagaaacaaaaattgcgtccagcttgagggggaaatgtggtaccccctggtgacccactcgcacctgccactccacatgaactgaaacacaagcctcactagaggcctcctcagactagccggcaatgggtagatgtacgccaaatacaaaagag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU579881 True 293 lncRNA 0.54 2 44090126 44090455

Neighbor

gene id symbol gene type direction distance location
LOC118964874 NA coding upstream 94971 43992833 ~ 43995155 (+)
LOC110526005 LOC106585229 coding upstream 108241 43937835 ~ 43981885 (+)
LOC118965079 NA coding upstream 1065428 43023780 ~ 43024698 (+)
col27a1b LOC106585224 coding upstream 1097895 42853787 ~ 42992257 (+)
LOC118965026 LOC106585222 coding upstream 1254020 42829811 ~ 42836106 (+)
LOC110526008 NA coding downstream 168641 44259096 ~ 44260124 (+)
LOC110526009 LOC106585233 coding downstream 194397 44284852 ~ 44295238 (+)
LOC110526012 LOC106585234 coding downstream 205159 44295614 ~ 44309360 (+)
LOC110526014 NA coding downstream 247271 44337537 ~ 44339789 (+)
LOC110526013 LOC106585235 coding downstream 255027 44345482 ~ 44348787 (+)
G510986 NA non-coding upstream 60208 44029690 ~ 44029918 (+)
G510950 NA non-coding upstream 87932 44001893 ~ 44002194 (+)
G510946 NA non-coding upstream 91135 43998783 ~ 43998991 (+)
G510932 NA non-coding upstream 99639 43989952 ~ 43990487 (+)
G511194 NA non-coding downstream 114905 44205360 ~ 44205588 (+)
G511197 NA non-coding downstream 119318 44209773 ~ 44211918 (+)
G511247 NA non-coding downstream 183962 44274417 ~ 44274816 (+)
G511249 NA non-coding downstream 187393 44277848 ~ 44278307 (+)
G511256 NA non-coding downstream 193796 44284251 ~ 44284595 (+)
G510416 NA other upstream 431633 43657468 ~ 43658493 (+)
G509160 NA other upstream 1519957 42567105 ~ 42570169 (+)
G508559 dph7 other upstream 1958186 42129225 ~ 42131940 (+)
G507768 LOC105030512 other upstream 2618718 41469551 ~ 41471408 (+)
fbxl17 fbxl17 other upstream 3230604 40568637 ~ 40886427 (+)
G512192 LOC106584908 other downstream 1093984 45184439 ~ 45185869 (+)
LOC110526028 ccdc60 other downstream 1127272 45187119 ~ 45236944 (+)
G512912 NA other downstream 1545134 45635589 ~ 45636250 (+)
LOC110526042 LOC106584891 other downstream 2096545 46076084 ~ 46190292 (+)
G513501 NA other downstream 2269501 46359956 ~ 46360585 (+)

Expression


Co-expression Network