G511194


Basic Information

Item Value
gene id G511194
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 44205360 ~ 44205588 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU580051
cttgactttttccaaatgttgttacattacaggcttattcaaaaatgtattcaaacattttttttcctCAGCTAtctacacaccccataatgacaaagcacattttttacaattttttaaaactattttctacgttgtagaataacagtgaagccatcaaaactatgaaataacacatatggaatcatgtagtaaccaaaaaagtgtcaaacaaatatttcagattctt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU580051 True 229 lncRNA 0.28 1 44205360 44205588

Neighbor

gene id symbol gene type direction distance location
LOC118964874 NA coding upstream 210205 43992833 ~ 43995155 (+)
LOC110526005 LOC106585229 coding upstream 223475 43937835 ~ 43981885 (+)
LOC118965079 NA coding upstream 1180662 43023780 ~ 43024698 (+)
col27a1b LOC106585224 coding upstream 1213129 42853787 ~ 42992257 (+)
LOC118965026 LOC106585222 coding upstream 1369254 42829811 ~ 42836106 (+)
LOC110526008 NA coding downstream 53508 44259096 ~ 44260124 (+)
LOC110526009 LOC106585233 coding downstream 79264 44284852 ~ 44295238 (+)
LOC110526012 LOC106585234 coding downstream 90026 44295614 ~ 44309360 (+)
LOC110526014 NA coding downstream 132138 44337537 ~ 44339789 (+)
LOC110526013 LOC106585235 coding downstream 139894 44345482 ~ 44348787 (+)
G511030 NA non-coding upstream 114905 44090126 ~ 44090455 (+)
G510986 NA non-coding upstream 175442 44029690 ~ 44029918 (+)
G510950 NA non-coding upstream 203166 44001893 ~ 44002194 (+)
G510946 NA non-coding upstream 206369 43998783 ~ 43998991 (+)
G511197 NA non-coding downstream 4185 44209773 ~ 44211918 (+)
G511247 NA non-coding downstream 68829 44274417 ~ 44274816 (+)
G511249 NA non-coding downstream 72260 44277848 ~ 44278307 (+)
G511256 NA non-coding downstream 78663 44284251 ~ 44284595 (+)
G510416 NA other upstream 546867 43657468 ~ 43658493 (+)
G509160 NA other upstream 1635191 42567105 ~ 42570169 (+)
G508559 dph7 other upstream 2073420 42129225 ~ 42131940 (+)
G507768 LOC105030512 other upstream 2733952 41469551 ~ 41471408 (+)
fbxl17 fbxl17 other upstream 3345838 40568637 ~ 40886427 (+)
G512192 LOC106584908 other downstream 978851 45184439 ~ 45185869 (+)
LOC110526028 ccdc60 other downstream 1012139 45187119 ~ 45236944 (+)
G512912 NA other downstream 1430001 45635589 ~ 45636250 (+)
LOC110526042 LOC106584891 other downstream 1981412 46076084 ~ 46190292 (+)
G513501 NA other downstream 2154368 46359956 ~ 46360585 (+)

Expression


Co-expression Network