G511249


Basic Information

Item Value
gene id G511249
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 44277848 ~ 44278307 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU580112
gttgtaatataataaagacagtagatctagctggtctgtcaaaatataatagagacagtagatctagcaggtctaaaataatatattcaaccttatgttccctgtactctatatatatatatgtttattatacctgttgatacagggctcatatgtgaaactattctaactgaacattttctttcacagtgacactgactccgaatgggagcccccagtgccaaggtgtccatcccccactgaagctggttcatctagctcctgccacaagtggtgttcatctgcacaaatgtatttctgcaggcatggatgtgcctcagggccaaaagggcacagcatggaggcgttgctgtgttctttgcaaaattaagtcccccatcacctgcaccacatgcttggtgaccctctgctttacagcagaaagagactgctatggcacctggcatcagcagtacaatat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU580112 True 460 lncRNA 0.43 1 44277848 44278307

Neighbor

gene id symbol gene type direction distance location
LOC110526008 NA coding upstream 17724 44259096 ~ 44260124 (+)
LOC118964874 NA coding upstream 282693 43992833 ~ 43995155 (+)
LOC110526005 LOC106585229 coding upstream 295963 43937835 ~ 43981885 (+)
LOC118965079 NA coding upstream 1253150 43023780 ~ 43024698 (+)
col27a1b LOC106585224 coding upstream 1285617 42853787 ~ 42992257 (+)
LOC110526009 LOC106585233 coding downstream 6545 44284852 ~ 44295238 (+)
LOC110526012 LOC106585234 coding downstream 17307 44295614 ~ 44309360 (+)
LOC110526014 NA coding downstream 59419 44337537 ~ 44339789 (+)
LOC110526013 LOC106585235 coding downstream 67175 44345482 ~ 44348787 (+)
LOC110526020 NA coding downstream 451760 44730067 ~ 44740687 (+)
G511247 NA non-coding upstream 3032 44274417 ~ 44274816 (+)
G511197 NA non-coding upstream 65930 44209773 ~ 44211918 (+)
G511194 NA non-coding upstream 72260 44205360 ~ 44205588 (+)
G511030 NA non-coding upstream 187393 44090126 ~ 44090455 (+)
G510986 NA non-coding upstream 247930 44029690 ~ 44029918 (+)
G511256 NA non-coding downstream 5944 44284251 ~ 44284595 (+)
G511281 NA non-coding downstream 61613 44339920 ~ 44342925 (+)
G511284 NA non-coding downstream 70818 44349125 ~ 44350035 (+)
G511283 NA non-coding downstream 71941 44350248 ~ 44351084 (+)
G510416 NA other upstream 619355 43657468 ~ 43658493 (+)
G509160 NA other upstream 1707679 42567105 ~ 42570169 (+)
G508559 dph7 other upstream 2145908 42129225 ~ 42131940 (+)
G507768 LOC105030512 other upstream 2806440 41469551 ~ 41471408 (+)
fbxl17 fbxl17 other upstream 3418326 40568637 ~ 40886427 (+)
G512192 LOC106584908 other downstream 906132 45184439 ~ 45185869 (+)
LOC110526028 ccdc60 other downstream 939420 45187119 ~ 45236944 (+)
G512912 NA other downstream 1357282 45635589 ~ 45636250 (+)
LOC110526042 LOC106584891 other downstream 1908693 46076084 ~ 46190292 (+)
G513501 NA other downstream 2081649 46359956 ~ 46360585 (+)

Expression


Co-expression Network