G511256


Basic Information

Item Value
gene id G511256
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 44284251 ~ 44284595 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU580124
attttattttatttatttcacctttatttaaccaggtaggcaagttgagaacaagttctcatttacaattgcgacctggccaagataaagcaaagcagttcgacagatacaacgacacagagttacacatggagtaaaacaaacatacagtcaataatacagtataaacaagtctatatacgatgtgagcaaatgaggtgggaagggaggtaaaggcaaaaaaaggccatgtatgacggctgtgtggtcccatgctgtttttacttgcgtactattgtttgtacagatgaacgtggtaccttcaggtgtttggaaattgctcccaagaatgacccagacttgtgg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU580124 True 345 lncRNA 0.39 1 44284251 44284595

Neighbor

gene id symbol gene type direction distance location
LOC110526008 NA coding upstream 24127 44259096 ~ 44260124 (+)
LOC118964874 NA coding upstream 289096 43992833 ~ 43995155 (+)
LOC110526005 LOC106585229 coding upstream 302366 43937835 ~ 43981885 (+)
LOC118965079 NA coding upstream 1259553 43023780 ~ 43024698 (+)
col27a1b LOC106585224 coding upstream 1292020 42853787 ~ 42992257 (+)
LOC110526009 LOC106585233 coding downstream 257 44284852 ~ 44295238 (+)
LOC110526012 LOC106585234 coding downstream 11019 44295614 ~ 44309360 (+)
LOC110526014 NA coding downstream 53131 44337537 ~ 44339789 (+)
LOC110526013 LOC106585235 coding downstream 60887 44345482 ~ 44348787 (+)
LOC110526020 NA coding downstream 445472 44730067 ~ 44740687 (+)
G511249 NA non-coding upstream 5944 44277848 ~ 44278307 (+)
G511247 NA non-coding upstream 9435 44274417 ~ 44274816 (+)
G511197 NA non-coding upstream 72333 44209773 ~ 44211918 (+)
G511194 NA non-coding upstream 78663 44205360 ~ 44205588 (+)
G511030 NA non-coding upstream 193796 44090126 ~ 44090455 (+)
G511281 NA non-coding downstream 55325 44339920 ~ 44342925 (+)
G511284 NA non-coding downstream 64530 44349125 ~ 44350035 (+)
G511283 NA non-coding downstream 65653 44350248 ~ 44351084 (+)
G511285 NA non-coding downstream 67955 44352550 ~ 44352753 (+)
G510416 NA other upstream 625758 43657468 ~ 43658493 (+)
G509160 NA other upstream 1714082 42567105 ~ 42570169 (+)
G508559 dph7 other upstream 2152311 42129225 ~ 42131940 (+)
G507768 LOC105030512 other upstream 2812843 41469551 ~ 41471408 (+)
fbxl17 fbxl17 other upstream 3424729 40568637 ~ 40886427 (+)
G512192 LOC106584908 other downstream 899844 45184439 ~ 45185869 (+)
LOC110526028 ccdc60 other downstream 933132 45187119 ~ 45236944 (+)
G512912 NA other downstream 1350994 45635589 ~ 45636250 (+)
LOC110526042 LOC106584891 other downstream 1902405 46076084 ~ 46190292 (+)
G513501 NA other downstream 2075361 46359956 ~ 46360585 (+)

Expression


Co-expression Network