G511281


Basic Information

Item Value
gene id G511281
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 44339920 ~ 44342925 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU580152
GGTGCCTATGACCACAGAGTGGGCATGTTTGCTCACGGTCTAACCACAAATACAGGCACTCCTCACAGAACACATGCTAGGTGGGAGAGACAAACACATGGGCTTTACACTCACATTCACTTTGGTTTACCAAAAGGAGTATGCATTGAGTATTGGTCAGTTATTCAATACAGTATTGATCAGTAAGGCCACAGAAAGAAACAAAAGAGTCATGGACAGTGACTTTAGCATCAAGCTACACCACACTAAGGgtcatataattttttttttaaatttaacttttatttaactaggaaagtcagttaagaacaaattcttatttacaatgacggcctaccccggccaaaccctcccctaactcggacaacgctgggccaattgtgcgccaccctatgggacacccgatcatggccggttgtgatacagcccataCTGTTACAGTCGGCTTGTGGTTACCATGGTTAACACCAGCGAATGATGTTATAATAAAGTATGTAGTAGCAGAGCGTATGGTTTGATGTATGTACTCTCACATGCCAGAGAAGAGCTATGGGGTTTCTGAAGTCACCCTGACAAATAGCACAATCTCCGGCCTCACTGCACTGCTGGCCCTCACACCTTAACTCTATGGGTGATAGAGCATTAGGTAGGTGGTCACAAAGAGACAAAGCTTGTGTTTACATTCCCATACCATACAGCAGGGattatcaactagattcagctgcggcCCAAATTCTTCTTGAGCGGGTGGTCGGGGCCCCCGGAACATACAGTAAATACAAATAATTTgaagactgcaaattgaccacaagaagcccaaacagatataatatttgactaaaacataatcatttcaaactttGCTTACATTTGTTTATGATCACGTGTCTCCCTATTATggaaatacttgggaacagagttccaaaattaaaataacttggagctgatttcctggtgtttttacaggttTTTAAGCGCCCcaaaatgtaaataataataataattctcaaTTTGTTTTGCTCTGAAAACTTGGGTGGCCAAATAAAACACCCGCAGGcaaccagttggggaaccctgctataCAGGGTCAACTCACTGTATACAGTATCTTTATTCTGATGTTGCATTTTAATACGGTACATGTAGTAAGATGATTCAATCAGAGTGCAAGATCAGGCAAAACCTACTGACAGTTGAAGGTTTACAACTGTAGCTAGTAGTGTTATAGGGCAGTGATGTGGGCTGGTATTTGGCCCTGATACTTTTCTTTACAGAAAGTAATCATTTCTCACCTGAGAACTGCAGAAAATTTCCATAGCCCTGCGTATGGCTGATACTCGGCCACAGAGGTCAAACGACTGAAAGATAAACATATTACACAGTCAAGGCACTAGAATTGGGTGCATTAGTGCAGCCCTGGACCAAAAGCCTGCCTCTGGAccaggttggtgaccactgtatAATATCCTTAAAACATGAGAAATTCTCACTCTGAAACATTACAAATTATTCCCTGAATACAGTGCCCTAGTGATTCCTTTTTTATGATTCCCTTTCTGCTCGACTTAATGACTCAAACCCGCCCCCactctctctaattttctatTCTTTAACCACTCACTGATGGGCAGTGTCCTGTCCCATTTTGCAATATTCTGAGGACACACCTCTGTGAACAGTTCTGACTCAATTTCTCCAAGTTCTCATGATCTCAATCCATAATAGTTTGACAGCTGCACGCACCCATTTACTAGGATTTTTTTTGCACACAGCagcaaaaataaggggttaaatagaTATAAAATATGTTGTTCCATGTGGTGAATTTGTTATTCAATTCATTTATTTaatattctttattttttttatacttcaaggggtcttaaaattcaaaatcaaatagctaaatgatcatCCCCCAGCTTTGACAGGGCTTAGACTTTTATGGGTTAAGAGCAGCACACTGTAAGAGTTTTAAAGCAGCACGCTCCAGACTAAGCATGGCCCCCGGCCTAGGCTCCACAGGCTGCAGCTTCTTTCCTCATTGTCCCTTCCTGCCCCTAGTcctggctacacacacacacacacaaccacttaATATGTCAAACTAAAACTGGACTCCAGCCAGAAACGTTGAGCCACAGAAGCAGTTCTAAAGCATTCTGGGACTTTCTGCTTGTTTTGTTTCATTAGTGATGCTGACCTCTCAACCTACCAATCAAAGCCTACCCAGCAGTTGGGTACGCCACCGTTATAAGTCCTTCCTATCAGCTGCTAAAAGCATGTTTTCATTCAATCTTGCTGCATGGTTATTAGAAAATACATTTCCCTGAAGTGGGAGTGCACCGACAGTGCCAAAAATGTAGCCAACAAGCCATGTTAAAATAACAGTAGAGCAAAGTAAATCAAATACATTTACAACCCACCACGGTATACAGTAAATCAATGTACAAGAGTCTGGTCTTTTTCTGTAGGCCTCCACTTGTACCGACTTGCATGTTTGTGCTTGTGAGATCATTAAATCAGTCCTTCCGTGGATGGAAGCAAAAGCAAAAGCACGAAGCAGAATGATTGGCTGATGTGTGGCCATGACTTCATCGGCTGAAAGTGGGCCACTTGGGCCTGTTTCAGGACAAGGTTtggttggggcagagggtggtggGAAAGGTGGGGGTTGGTTGGTCGGTTGGTTTAGTGATAGCGTGGCGCGGGTACCCCAGCAGCTGAGGAGGAGTGGGAGCACACACAGCAGTAATGGTCCAGCCCCAGGGAAGGATGACCTCACCTCTGCACCCCCCCCAGGGAGAAATGAGCTCAGTGGCAGCAGCCTCACTCTCTGATTGGCCTGTTTATCAGCCGAGTCAAAATACACTCTGTGACCCCAACGGGCAAAACCTGCACGCAGATAGAACTCCAACAGATAGACAGACAATGACAAATACACACTCTTTCTGTGACCACAACATGTTATAAACAACCCTTTCGTGTGGATAAGACACcaaaatc

Function

NR:

description
mitogen-activated protein kinase 3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU580152 True 3006 lncRNA 0.43 1 44339920 44342925

Neighbor

gene id symbol gene type direction distance location
LOC110526014 NA coding upstream 131 44337537 ~ 44339789 (+)
LOC110526012 LOC106585234 coding upstream 30560 44295614 ~ 44309360 (+)
LOC110526009 LOC106585233 coding upstream 44682 44284852 ~ 44295238 (+)
LOC110526008 NA coding upstream 79796 44259096 ~ 44260124 (+)
LOC118964874 NA coding upstream 344765 43992833 ~ 43995155 (+)
LOC110526013 LOC106585235 coding downstream 2557 44345482 ~ 44348787 (+)
LOC110526020 NA coding downstream 387142 44730067 ~ 44740687 (+)
LOC110526024 suds3 coding downstream 530460 44873385 ~ 44895982 (+)
LOC110526025 srrm4 coding downstream 718733 45061658 ~ 45152985 (+)
LOC110526027 hspb8 coding downstream 813056 45155981 ~ 45178825 (+)
G511256 NA non-coding upstream 55325 44284251 ~ 44284595 (+)
G511249 NA non-coding upstream 61613 44277848 ~ 44278307 (+)
G511247 NA non-coding upstream 65104 44274417 ~ 44274816 (+)
G511197 NA non-coding upstream 128002 44209773 ~ 44211918 (+)
G511284 NA non-coding downstream 6200 44349125 ~ 44350035 (+)
G511283 NA non-coding downstream 7323 44350248 ~ 44351084 (+)
G511285 NA non-coding downstream 9625 44352550 ~ 44352753 (+)
G511389 NA non-coding downstream 23050 44365975 ~ 44367235 (+)
G511417 NA non-coding downstream 68907 44411832 ~ 44432361 (+)
G510416 NA other upstream 681427 43657468 ~ 43658493 (+)
G509160 NA other upstream 1769751 42567105 ~ 42570169 (+)
G508559 dph7 other upstream 2207980 42129225 ~ 42131940 (+)
G507768 LOC105030512 other upstream 2868512 41469551 ~ 41471408 (+)
fbxl17 fbxl17 other upstream 3480398 40568637 ~ 40886427 (+)
G512192 LOC106584908 other downstream 841514 45184439 ~ 45185869 (+)
LOC110526028 ccdc60 other downstream 874802 45187119 ~ 45236944 (+)
G512912 NA other downstream 1292664 45635589 ~ 45636250 (+)
LOC110526042 LOC106584891 other downstream 1844075 46076084 ~ 46190292 (+)
G513501 NA other downstream 2017031 46359956 ~ 46360585 (+)

Expression


Co-expression Network