G511376


Basic Information

Item Value
gene id G511376
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 44350427 ~ 44351990 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU580263
cacgtgccaaatacaacaggttaccatgaaatgcttacttacacactcttaaccaacaatgcagttcaatacagagttaagaaaatattttgtAACTAAAGTaagaaataaaaagtaacacaaaataatAAGGCTATATAcgaagggtacaggttagtcgaggtaatttgtacatgtaggtaggggtaaagtgactatgcattgataataatcagtgagtagcagcagtgtaaaaacaaagggggtcaatgtaaatagtccgggtggccatttgattaattgttcagcagtcttttggcttgggggtagaagctgttaaggagccttttggacctagacttggcactccggtaccgcttgccattcggtagcagagagaacagcctatggcttgggtgactagagtcttggacaattttttgggccttcctctgacaccgcctagtatataggtcctggatgtcaggaagcttggccccagtaatgtactgggcagtacgcaatACCCTCTTTAGCAACTTacggtcggaggcagagcagttgccataccaggcagtgatgcaaaccgtcaggatgctctcgatggtacagctgtaaaacctgttgaggatctgaggacccatgccaaatcttttcagtctcttgagggggaaaaggttttgttgtgcccttttCACCACtatcttggtatgtttggaccatgatagtttgttggtgatgtggacaccaaggaagttgaaactctcgacccgctccacgacagccccatcgatgtgaatgggtGAACTCCTTAGTCTTACTCACGTtgggggagaggttgttgtcctggcactacactgccaggtctctgacctcctccctataggcggtctcatcGTTGATCAGGCTTaaaactgttgtgttgtcagcaaacttaatgatggtgttggagtcatgcttggccacgcagtcgtgggtgaacagggagtacagggaccccgtgttgaggatcagcgttgcagatgtgttgttgcctacccttaccacctgggggtggtccgtcaggaagtccaggatccagttgcagatggaggtgtttagtcccagggtccttagtttagtgatgagctttgtgggcactgtagtgttgaacactgagctgtagtcaatgaacagaattctcacgtgttccttttgtccaggtgggaaagggcagtgtggagtgcgattgagaatgcgtcatctgtggatctgttggggtgctatgcaaattggagtgggtctagggtttccgggattatggtgttgatgtgagccatgaccagcctttcaaagtacttcatggctaccgacgtgagtgctacggggcatttaggcaggttacctttgctttcttgggaacagggtctatggtggtctgcttataacatgtaggtattacagactcagtcagggagaggttgaaaatgttagggccgccgcttctggatgataatttttcttgtttgcttatggccttaaacagctcgttgagtgcggccttagtgccagcatcgattTGGGATGGTAAATAGACTGCTCTTGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU580263 True 1564 lncRNA 0.47 1 44350427 44351990

Neighbor

gene id symbol gene type direction distance location
fbxw8 fbxw8 coding downstream 4978 44309894 ~ 44345449 (-)
nf2a nf2 coding downstream 78041 44209338 ~ 44272386 (-)
LOC110526006 LOC106584969 coding downstream 251296 44045046 ~ 44099131 (-)
prodhb LOC100194675 coding downstream 395170 43940790 ~ 43955257 (-)
LOC110526003 LOC106585228 coding downstream 537017 43689304 ~ 43813410 (-)
LOC110526015 gatsl3 coding upstream 13866 44365856 ~ 44394019 (-)
LOC110526901 NA coding upstream 50821 44402811 ~ 44409947 (-)
lrrc74b lrrc74b coding upstream 59706 44411696 ~ 44435774 (-)
nos1 LOC106585241 coding upstream 84302 44436292 ~ 44501179 (-)
LOC110526017 LOC106585243 coding upstream 184019 44536009 ~ 44592618 (-)
G511375 NA non-coding downstream 264 44349657 ~ 44350163 (-)
G511345 NA non-coding downstream 65847 44284274 ~ 44284580 (-)
G511342 NA non-coding downstream 68233 44281975 ~ 44282194 (-)
G511189 NA non-coding downstream 147032 44203136 ~ 44203395 (-)
G511379 NA non-coding upstream 2945 44354935 ~ 44355252 (-)
G511885 NA non-coding upstream 171913 44523903 ~ 44550277 (-)
G511957 NA non-coding upstream 290409 44642399 ~ 44642599 (-)
G510310 NA other downstream 826319 43523714 ~ 43524108 (-)
G509952 NA other downstream 1225040 43124581 ~ 43125387 (-)
G509949 LOC106578716 other downstream 1227335 43122546 ~ 43123092 (-)
znrf3 LOC106584905 other upstream 922648 45270568 ~ 45384850 (-)
apba1a apba1 other upstream 2007898 46263121 ~ 46360886 (-)
LOC110526044 LOC107699739 other upstream 2018700 46367701 ~ 46430607 (-)
G514434 NA other upstream 2558668 46910658 ~ 46910950 (-)
G514777 NA other upstream 2664172 47016162 ~ 47016496 (-)

Expression


Co-expression Network