G511535


Basic Information

Item Value
gene id G511535
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 44588241 ~ 44588521 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU580435
ctgtccccctccctcttttacaccgctgctactctctgttgttatcatctatgcatcgtcactttaataactctacctacatgtacatattacctcaactaaccggtgcccccgaacattgactctgtaccggtacccccctgtgtatagtctcactattgttattttactgctgctctgtaattacttgttacttttatttcttactcTTCCTCGTATTTttttaaaaactgcattgttgattaggggctcgtaagtaagcatttcactgtaaggtcttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU580435 True 281 lncRNA 0.41 1 44588241 44588521

Neighbor

gene id symbol gene type direction distance location
LOC110526013 LOC106585235 coding upstream 239454 44345482 ~ 44348787 (+)
LOC110526014 NA coding upstream 248452 44337537 ~ 44339789 (+)
LOC110526012 LOC106585234 coding upstream 278881 44295614 ~ 44309360 (+)
LOC110526009 LOC106585233 coding upstream 293003 44284852 ~ 44295238 (+)
LOC110526008 NA coding upstream 328117 44259096 ~ 44260124 (+)
LOC110526020 NA coding downstream 141546 44730067 ~ 44740687 (+)
LOC110526024 suds3 coding downstream 284864 44873385 ~ 44895982 (+)
LOC110526025 srrm4 coding downstream 473137 45061658 ~ 45152985 (+)
LOC110526027 hspb8 coding downstream 567460 45155981 ~ 45178825 (+)
LOC110526028 ccdc60 coding downstream 598598 45187119 ~ 45236944 (+)
G511532 NA non-coding upstream 4878 44580252 ~ 44583363 (+)
G511436 NA non-coding upstream 140285 44447497 ~ 44447956 (+)
G511435 NA non-coding upstream 140818 44447067 ~ 44447423 (+)
G511431 NA non-coding upstream 146850 44440495 ~ 44441391 (+)
G511430 NA non-coding upstream 148768 44436338 ~ 44439473 (+)
G511564 NA non-coding downstream 34728 44623249 ~ 44623718 (+)
G511573 NA non-coding downstream 56703 44645224 ~ 44645448 (+)
G511577 NA non-coding downstream 66704 44655225 ~ 44655568 (+)
G511647 NA non-coding downstream 161120 44749641 ~ 44750048 (+)
G510416 NA other upstream 929748 43657468 ~ 43658493 (+)
G509160 NA other upstream 2018072 42567105 ~ 42570169 (+)
G508559 dph7 other upstream 2456301 42129225 ~ 42131940 (+)
G507768 LOC105030512 other upstream 3116833 41469551 ~ 41471408 (+)
fbxl17 fbxl17 other upstream 3728719 40568637 ~ 40886427 (+)
G512192 LOC106584908 other downstream 595918 45184439 ~ 45185869 (+)
G512912 NA other downstream 1047068 45635589 ~ 45636250 (+)
LOC110526042 LOC106584891 other downstream 1598479 46076084 ~ 46190292 (+)
G513501 NA other downstream 1771435 46359956 ~ 46360585 (+)

Expression


Co-expression Network