G511564


Basic Information

Item Value
gene id G511564
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 44623249 ~ 44623718 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU580464
agccgggctggaatactgattttcgtttttttcattcctgttgatattgcctaaagatatagaattattctgacaattgctatagaatcgctcgaatttactgatataagttcataaaggaatttactgaattgtttacagaaagtatttaaataattcactgaacaactcttagttgtctagaaattctatctatatttcctaaagagctagaattactctgaaaattgttatagaaccgcatatattcactgatatattgttccaaaaggaaatcgcc

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU580464 True 280 lncRNA 0.30 2 44623249 44623718

Neighbor

gene id symbol gene type direction distance location
LOC110526013 LOC106585235 coding upstream 274462 44345482 ~ 44348787 (+)
LOC110526014 NA coding upstream 283460 44337537 ~ 44339789 (+)
LOC110526012 LOC106585234 coding upstream 313889 44295614 ~ 44309360 (+)
LOC110526009 LOC106585233 coding upstream 328011 44284852 ~ 44295238 (+)
LOC110526008 NA coding upstream 363125 44259096 ~ 44260124 (+)
LOC110526020 NA coding downstream 106349 44730067 ~ 44740687 (+)
LOC110526024 suds3 coding downstream 249667 44873385 ~ 44895982 (+)
LOC110526025 srrm4 coding downstream 437940 45061658 ~ 45152985 (+)
LOC110526027 hspb8 coding downstream 532263 45155981 ~ 45178825 (+)
LOC110526028 ccdc60 coding downstream 563401 45187119 ~ 45236944 (+)
G511535 NA non-coding upstream 34728 44588241 ~ 44588521 (+)
G511532 NA non-coding upstream 39886 44580252 ~ 44583363 (+)
G511436 NA non-coding upstream 175293 44447497 ~ 44447956 (+)
G511435 NA non-coding upstream 175826 44447067 ~ 44447423 (+)
G511431 NA non-coding upstream 181858 44440495 ~ 44441391 (+)
G511573 NA non-coding downstream 21506 44645224 ~ 44645448 (+)
G511577 NA non-coding downstream 31507 44655225 ~ 44655568 (+)
G511647 NA non-coding downstream 125923 44749641 ~ 44750048 (+)
G511781 NA non-coding downstream 396529 45020247 ~ 45045920 (+)
G510416 NA other upstream 964756 43657468 ~ 43658493 (+)
G509160 NA other upstream 2053080 42567105 ~ 42570169 (+)
G508559 dph7 other upstream 2491309 42129225 ~ 42131940 (+)
G507768 LOC105030512 other upstream 3151841 41469551 ~ 41471408 (+)
fbxl17 fbxl17 other upstream 3763727 40568637 ~ 40886427 (+)
G512192 LOC106584908 other downstream 560721 45184439 ~ 45185869 (+)
G512912 NA other downstream 1011871 45635589 ~ 45636250 (+)
LOC110526042 LOC106584891 other downstream 1563282 46076084 ~ 46190292 (+)
G513501 NA other downstream 1736238 46359956 ~ 46360585 (+)

Expression


Co-expression Network