G512277


Basic Information

Item Value
gene id G512277
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 45207259 ~ 45207720 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU581221
GACTTGTCTGgtttggctagcttgctagctagtttgCGTTTAGAAAATGCATCTCAGCACCGGCTTCTTGATCAATGAGACCTGACTACATTATGAAAATGGCAGAGAGCTTGTGGTGAGGAAGACTACTCTGCTCTGGGCTTTTTTTGCGCTGTAGCAACAGCAGAGGCTACACTTGTGGTTTATGGAGGAGTATGAAGTCCAGGCTAGAGAGAGATTGAGCTGAGGAGGACATCGGGGCCAGCAAGCCAACCCCATCACCTGGCAATACAGGCCACAGAGAGGCAGAGGATAACATCAAAGCCAGCAAGCCAACTGCATCACTGTCATCTGGCATCACCTTCATCAAACTCAGTTTAGGAGCCTGAGATTGCTGATCTACGTTTTGTTATGTCTTAAATGTGTTACCCAAGTATGCCTAGTAGGATAGGTATTCTATGCTTATGtttgttcataaaaaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU581221 True 462 lncRNA 0.46 1 45207259 45207720

Neighbor

gene id symbol gene type direction distance location
LOC110526027 hspb8 coding upstream 28434 45155981 ~ 45178825 (+)
LOC110526025 srrm4 coding upstream 54274 45061658 ~ 45152985 (+)
LOC110526024 suds3 coding upstream 311277 44873385 ~ 44895982 (+)
LOC110526020 NA coding upstream 466687 44730067 ~ 44740687 (+)
LOC110526013 LOC106585235 coding upstream 858472 44345482 ~ 44348787 (+)
si:dkey-174n20.1 LOC106584900 coding downstream 440014 45647734 ~ 45654067 (+)
LOC110526036 LOC106584896 coding downstream 605678 45813398 ~ 45837739 (+)
LOC110526902 NA coding downstream 665099 45872819 ~ 45873709 (+)
LOC118964875 NA coding downstream 692199 45899919 ~ 45901120 (+)
LOC110525032 NA coding downstream 750710 45958430 ~ 45959299 (+)
G512188 NA non-coding upstream 149224 45057711 ~ 45058035 (+)
G511781 NA non-coding upstream 161339 45020247 ~ 45045920 (+)
G511647 NA non-coding upstream 457211 44749641 ~ 44750048 (+)
G511577 NA non-coding upstream 551691 44655225 ~ 44655568 (+)
G512284 NA non-coding downstream 5062 45212782 ~ 45213075 (+)
LOC110526028 ccdc60 non-coding downstream 16106 45187119 ~ 45236944 (+)
G512295 NA non-coding downstream 22190 45229910 ~ 45230320 (+)
G512297 NA non-coding downstream 25334 45233054 ~ 45233283 (+)
G512299 NA non-coding downstream 27879 45235599 ~ 45235951 (+)
G512192 LOC106584908 other upstream 21390 45184439 ~ 45185869 (+)
G510416 NA other upstream 1548766 43657468 ~ 43658493 (+)
G509160 NA other upstream 2637090 42567105 ~ 42570169 (+)
G508559 dph7 other upstream 3075319 42129225 ~ 42131940 (+)
G507768 LOC105030512 other upstream 3735851 41469551 ~ 41471408 (+)
G512912 NA other downstream 427869 45635589 ~ 45636250 (+)
LOC110526042 LOC106584891 other downstream 979280 46076084 ~ 46190292 (+)
G513501 NA other downstream 1152236 46359956 ~ 46360585 (+)
G513745 NA other downstream 1692841 46900561 ~ 46901123 (+)

Expression


Co-expression Network