G512295


Basic Information

Item Value
gene id G512295
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 45229910 ~ 45230320 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU581239
gcattatTGAGGTCGGACACTggtgttgggcaattaggcctgtctctcagtctgcattccagttcaaatcaaatcaaatcaaatcaaattttatttgtcacatacacatggttagcagatgttaatgcgagtgtagcgaaatgcttgtgcttctagttccgacaatgcagtaataaccaacaagtaatctaactaacaattccagaactactgtcttgtacacagtgtaaggggataaagaatgtgtacataaggatatatgaatgagtgatggtacagagcagcataggcaagatacagtagatggtatcgagtacagtatatacatatgagatgagtatgtaaacaaagtggcatagttaaagtggctagtgatacatgtattacataaggatacagtcgatgatatag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU581239 True 411 lncRNA 0.37 1 45229910 45230320

Neighbor

gene id symbol gene type direction distance location
LOC110526027 hspb8 coding upstream 51085 45155981 ~ 45178825 (+)
LOC110526025 srrm4 coding upstream 76925 45061658 ~ 45152985 (+)
LOC110526024 suds3 coding upstream 333928 44873385 ~ 44895982 (+)
LOC110526020 NA coding upstream 489338 44730067 ~ 44740687 (+)
LOC110526013 LOC106585235 coding upstream 881123 44345482 ~ 44348787 (+)
si:dkey-174n20.1 LOC106584900 coding downstream 417414 45647734 ~ 45654067 (+)
LOC110526036 LOC106584896 coding downstream 583078 45813398 ~ 45837739 (+)
LOC110526902 NA coding downstream 642499 45872819 ~ 45873709 (+)
LOC118964875 NA coding downstream 669599 45899919 ~ 45901120 (+)
LOC110525032 NA coding downstream 728110 45958430 ~ 45959299 (+)
G512284 NA non-coding upstream 16835 45212782 ~ 45213075 (+)
G512277 NA non-coding upstream 22190 45207259 ~ 45207720 (+)
G512188 NA non-coding upstream 171875 45057711 ~ 45058035 (+)
G511781 NA non-coding upstream 183990 45020247 ~ 45045920 (+)
G511647 NA non-coding upstream 479862 44749641 ~ 44750048 (+)
G512297 NA non-coding downstream 2734 45233054 ~ 45233283 (+)
G512299 NA non-coding downstream 5279 45235599 ~ 45235951 (+)
G512263 NA non-coding downstream 6883 45237203 ~ 45237802 (+)
G512306 NA non-coding downstream 13110 45243430 ~ 45243648 (+)
G512308 NA non-coding downstream 17045 45247365 ~ 45248229 (+)
LOC110526028 ccdc60 other upstream 9128 45187119 ~ 45236944 (+)
G512192 LOC106584908 other upstream 44041 45184439 ~ 45185869 (+)
G510416 NA other upstream 1571417 43657468 ~ 43658493 (+)
G509160 NA other upstream 2659741 42567105 ~ 42570169 (+)
G508559 dph7 other upstream 3097970 42129225 ~ 42131940 (+)
G512912 NA other downstream 405269 45635589 ~ 45636250 (+)
LOC110526042 LOC106584891 other downstream 956680 46076084 ~ 46190292 (+)
G513501 NA other downstream 1129636 46359956 ~ 46360585 (+)
G513745 NA other downstream 1670241 46900561 ~ 46901123 (+)
G514464 NA other downstream 1696522 46926842 ~ 46927714 (+)

Expression


Co-expression Network