G512297


Basic Information

Item Value
gene id G512297
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 45233054 ~ 45233283 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU581241
gtattatatacacTCTCTTTATTTTTTCGAGTCAATACTGTGCACTCATACATTTGTAAACTTTACTGTGCACTCATACAtgggtaaatgtgtgtgtgtgtacacgttttTGTATGTTGGTGTACAATTTGAATGTTTGCACAACAGTTTGTAAATTTGTGTGAAATCAATTGAACTCCTCTACAAGGTGCCCTACGTCCTATCCAGGTTTATTTCTAGATgatttatac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU581241 True 230 lncRNA 0.34 1 45233054 45233283

Neighbor

gene id symbol gene type direction distance location
LOC110526027 hspb8 coding upstream 54229 45155981 ~ 45178825 (+)
LOC110526025 srrm4 coding upstream 80069 45061658 ~ 45152985 (+)
LOC110526024 suds3 coding upstream 337072 44873385 ~ 44895982 (+)
LOC110526020 NA coding upstream 492482 44730067 ~ 44740687 (+)
LOC110526013 LOC106585235 coding upstream 884267 44345482 ~ 44348787 (+)
si:dkey-174n20.1 LOC106584900 coding downstream 414451 45647734 ~ 45654067 (+)
LOC110526036 LOC106584896 coding downstream 580115 45813398 ~ 45837739 (+)
LOC110526902 NA coding downstream 639536 45872819 ~ 45873709 (+)
LOC118964875 NA coding downstream 666636 45899919 ~ 45901120 (+)
LOC110525032 NA coding downstream 725147 45958430 ~ 45959299 (+)
G512295 NA non-coding upstream 2734 45229910 ~ 45230320 (+)
G512284 NA non-coding upstream 19979 45212782 ~ 45213075 (+)
G512277 NA non-coding upstream 25334 45207259 ~ 45207720 (+)
G512188 NA non-coding upstream 175019 45057711 ~ 45058035 (+)
G511781 NA non-coding upstream 187134 45020247 ~ 45045920 (+)
G512299 NA non-coding downstream 2316 45235599 ~ 45235951 (+)
G512263 NA non-coding downstream 3920 45237203 ~ 45237802 (+)
G512306 NA non-coding downstream 10147 45243430 ~ 45243648 (+)
G512308 NA non-coding downstream 14082 45247365 ~ 45248229 (+)
G512310 NA non-coding downstream 16709 45249992 ~ 45250211 (+)
LOC110526028 ccdc60 other upstream 12272 45187119 ~ 45236944 (+)
G512192 LOC106584908 other upstream 47185 45184439 ~ 45185869 (+)
G510416 NA other upstream 1574561 43657468 ~ 43658493 (+)
G509160 NA other upstream 2662885 42567105 ~ 42570169 (+)
G508559 dph7 other upstream 3101114 42129225 ~ 42131940 (+)
G512912 NA other downstream 402306 45635589 ~ 45636250 (+)
LOC110526042 LOC106584891 other downstream 953717 46076084 ~ 46190292 (+)
G513501 NA other downstream 1126673 46359956 ~ 46360585 (+)
G513745 NA other downstream 1667278 46900561 ~ 46901123 (+)
G514464 NA other downstream 1693559 46926842 ~ 46927714 (+)

Expression


Co-expression Network