G512306


Basic Information

Item Value
gene id G512306
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 45243430 ~ 45243648 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU581250
ATAGAAAGATAACCCAGAATGTGAATCTTGTTAATTTTGTGTGTGATCTGGTATGGTGCTAGTACTTCTAGGTATGACAGTTGGAGTTGCTGTAGTACGGACTGGGGGTTGGAGTAACTGAAAGTTAAAATACTGTTTATATCAACACACATTTAGCTGGTGTTTAGATATGTGGTTCCTATCCCCAATGATAGAAGATCATGTAGTTTTGTGTTTTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU581250 True 219 lncRNA 0.37 1 45243430 45243648

Neighbor

gene id symbol gene type direction distance location
LOC110526028 ccdc60 coding upstream 6486 45187119 ~ 45236944 (+)
LOC110526027 hspb8 coding upstream 64605 45155981 ~ 45178825 (+)
LOC110526025 srrm4 coding upstream 90445 45061658 ~ 45152985 (+)
LOC110526024 suds3 coding upstream 347448 44873385 ~ 44895982 (+)
LOC110526020 NA coding upstream 502858 44730067 ~ 44740687 (+)
si:dkey-174n20.1 LOC106584900 coding downstream 404086 45647734 ~ 45654067 (+)
LOC110526036 LOC106584896 coding downstream 569750 45813398 ~ 45837739 (+)
LOC110526902 NA coding downstream 629171 45872819 ~ 45873709 (+)
LOC118964875 NA coding downstream 656271 45899919 ~ 45901120 (+)
LOC110525032 NA coding downstream 714782 45958430 ~ 45959299 (+)
G512263 NA non-coding upstream 5628 45237203 ~ 45237802 (+)
G512299 NA non-coding upstream 7479 45235599 ~ 45235951 (+)
G512297 NA non-coding upstream 10147 45233054 ~ 45233283 (+)
G512295 NA non-coding upstream 13110 45229910 ~ 45230320 (+)
G512308 NA non-coding downstream 3717 45247365 ~ 45248229 (+)
G512310 NA non-coding downstream 6344 45249992 ~ 45250211 (+)
G512311 xbp1 non-coding downstream 8241 45251889 ~ 45254762 (+)
G512316 NA non-coding downstream 24849 45268497 ~ 45268717 (+)
G512354 NA non-coding downstream 74466 45318114 ~ 45380696 (+)
G512192 LOC106584908 other upstream 57561 45184439 ~ 45185869 (+)
G510416 NA other upstream 1584937 43657468 ~ 43658493 (+)
G509160 NA other upstream 2673261 42567105 ~ 42570169 (+)
G508559 dph7 other upstream 3111490 42129225 ~ 42131940 (+)
G512912 NA other downstream 391941 45635589 ~ 45636250 (+)
LOC110526042 LOC106584891 other downstream 943352 46076084 ~ 46190292 (+)
G513501 NA other downstream 1116308 46359956 ~ 46360585 (+)
G513745 NA other downstream 1656913 46900561 ~ 46901123 (+)
G514464 NA other downstream 1683194 46926842 ~ 46927714 (+)

Expression


Co-expression Network