G512668



Basic Information


Item Value
gene id G512668
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 45246571 ~ 45247308 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU581639
gattttctggattttttttctcattttgtctgtcatagttgaagtgtacctatgatgaaaattacaggcctctctcatctttttaagtgggagaacttgcacaattggtggctgactaaatacttttttgccccactgtacacatggttaacagatgttaatgcgagtgtagcaaaatgcttgtgcttctatttccgacaatgcagtaataaccaacgagtaatctaacctaacaattccaaaactactaccttatacacacaagtgtaaaggaataaagaatatgtacataaatatatatgaatgagtgatggtacagaacggcataggcaagatgcagtagatggtatcgagtacagtatatacataagagatgagtaatgtagggtttgtaaacaaagtggcatagtttaaagtggctagtgatacatgtaatacataaagatgcagtagatgatatagagtacagtatatacatatgagatgagtaatgtagggtatgtaaacattatattaagtagcattgtttaaagtgtctagtgatatatttttacatcaatttccataaatttccattattaaagtggctggagttgagtcagtgtgttggcagcagccactcaatgttagtggtggctgtttaacagtctgatggccttgagatagaagctgtttttcagtctctcggtcccagctttgatgcacctttactgacctcgacttctggatgatagcggg

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU581639 True 738 lncRNA 0.36 1 45246571 45247308

Neighbor


gene id symbol gene type direction distance location
trnaw-cca NA coding downstream 18093 45228407 ~ 45228478 (-)
LOC110526026 LOC106584908 coding downstream 60919 45179240 ~ 45185652 (-)
taok3a taok3 coding downstream 390977 44762891 ~ 44855594 (-)
LOC110526021 vsig10 coding downstream 490428 44749601 ~ 44756143 (-)
wsb2 wsb2 coding downstream 497961 44740939 ~ 44748610 (-)
xbp1 xbp1 coding upstream 4578 45251886 ~ 45254834 (-)
znrf3 LOC106584905 coding upstream 23260 45270568 ~ 45384850 (-)
coq5 coq5 coding upstream 167667 45414975 ~ 45418844 (-)
kremen1 kremen1 coding upstream 190026 45437334 ~ 45553374 (-)
LOC110526035 LOC105889509 coding upstream 408677 45655985 ~ 45743095 (-)
G512614 NA non-coding downstream 8542 45236479 ~ 45238029 (-)
G512657 NA non-coding downstream 20328 45225554 ~ 45226243 (-)
G512655 NA non-coding downstream 23468 45222877 ~ 45223103 (-)
G512650 NA non-coding downstream 29130 45217240 ~ 45217441 (-)
G512599 NA non-coding downstream 93679 45151284 ~ 45152892 (-)
G512676 NA non-coding upstream 19114 45266422 ~ 45266626 (-)
G512678 NA non-coding upstream 21154 45268462 ~ 45268701 (-)
G512825 NA non-coding upstream 256361 45503669 ~ 45503995 (-)
G512888 NA non-coding upstream 368591 45615899 ~ 45616159 (-)
G512898 NA non-coding upstream 376722 45624030 ~ 45624246 (-)
nf2a nf2 other downstream 1034748 44209338 ~ 44272386 (-)
prodhb LOC100194675 other downstream 1298182 43940790 ~ 43955257 (-)
G510310 NA other downstream 1722463 43523714 ~ 43524108 (-)
G509952 NA other downstream 2121184 43124581 ~ 43125387 (-)
G509949 LOC106578716 other downstream 2123479 43122546 ~ 43123092 (-)
apba1a apba1 other upstream 1112580 46263121 ~ 46360886 (-)
LOC110526044 LOC107699739 other upstream 1123382 46367701 ~ 46430607 (-)
G514434 NA other upstream 1663350 46910658 ~ 46910950 (-)
G514777 NA other upstream 1768854 47016162 ~ 47016496 (-)

Expression



Co-expression Network