G512418


Basic Information

Item Value
gene id G512418
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 45415477 ~ 45416468 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU581373
TCAATAAAGTTTTATTTGATTGATTTGTACACAATTGGTGGTACAATTGTACACAATTGTGTGGTTCAGTCAAGTTTTGGCAAGAGGTCCATATCAATCCATAACTTTCAGAGTGATCAGTGTAGTTTCTCAGTTGACCAGAGGAGGGTAGtatgactcttcacatgggaggACTGCTCTATAAAGATGGGGAGAAGTGACTAAATCAAGCATTTAGATGTTTCACAGAAGTTAGTACTTATTTTGAAAGCAGAAAACAATATTGGATTGCTAAAGCACAAAAGAGGAATTAGGAGTTTACTTTTATTGTAAAACCAGTTGACATTACAAAAAAGATTGAGATTTTAAATAGTTGTCATGATGCACCCTTTGCTAAGTGCTCCTCCCATTGGTTGCTCAGgtaacatcccaaatggcagaacttCTGGCCTCTAGAGGACCTGTGAGCAGAGGTTGGGTTCACATTGAAACCTgccaaatatattatatattgtacCCCCTGAGAAAAGCCAGCCTTTCCTCAAACCAccagaaaaaataaatacaatacacaaaTATTGTAGACAGCATGTCAGTGTTTCCATTTCTGTGTATATTGTTTCCTTGACGTTTGCGGTGGAATCTGCTTGGGTTTAAAACCCCAGTCACACATACCCTAGAGGAGCTGTCTGACACTGGGCCTCAGCCTTGACTGCTTAGAGTTAagtccagggcctgtattcataaaatGTCTCAGTGTATGAGGGCTGATCTAGGAGCAGTTGCCTTTTAGATCCTAATGAATACAAATATAAATCAACAGTGGGTACCCGTTCCGAGATCAGCACTGCTCTGTTCACAGCTTGAATCCAGAGTGTAGGGCCACCACTCCTCCTGTCAGGTTGTGGTAGCGGACAGAAAATAACCCTGCATCCTCAATCATT
>TU581374
TCAATAAAGTTTTATTTGATTGATTTGTACACAATTGGTGGTACAATTGTACACAATTGTGTGGTTCAGTCAAGTTTTGGCAAGAGGTCCATATCAATCCATAACTTTCAGAGTGATCAGTGTAGTTTCTCAGTTGACCAGAGGAGGGTAGtatgactcttcacatgggaggACTGCTCTATAAAGATGGGGAGAAGTGACTAAATCAAGCATTTAGATGTTTCACAGAAGTTAGTACTTATTTTGAAAGCAGAAAACAATATTGGATTGCTAAAGCACAAAAGAGGAATTAGGAGTTTACTTTTATTGTAAAACCAGTTGACATTACAAAAAAGATTGAGATTTTAAATAGTTGTCATGATGCACCCTTTGCTAAGTGCTCCTCCCATTGGTTGCTCAGgtaacatcccaaatggcaCCTCTAGAGGACCTGTGAGCAGAGGTTGGGTTCACATTGAAACCTgccaaatatattatatattgtacCCCCTGAGAAAAGCCAGCCTTTCCTCAAACCAccagaaaaaataaatacaatacacaaaTATTGTAGACAGCATGTCAGTGTTTCCATTTCTGTGTATATTGTTTCCTTGACGTTTGCGGTGGAATCTGCTTGGGTTTAAAACCCCAGTCACACATACCCTAGAGGAGCTGTCTGACACTGGGCCTCAGCCTTGACTGCTTAGAGTTAagtccagggcctgtattcataaaatGTCTCAGTGTATGAGGGCTGATCTAGGAGCAGTTGCCTTTTAGATCCTAATGAATACAAATATAAATCAACAGTGGGTACCCGTTCCGAGATCAGCACTGCTCTGTTCACAGCTTGAATCCAGAGTGTAGGGCCACCACTCCTCCTGTCAGGTTGTGGTAGCGGACAGAAAATAACCCTGCATCCTCAATCATT

Function

NR:

description
PREDICTED: 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU581373 False 923 lncRNA 0.41 2 45415477 45416468
TU581374 True 913 lncRNA 0.41 2 45415477 45416468

Neighbor

gene id symbol gene type direction distance location
LOC110526028 ccdc60 coding upstream 178533 45187119 ~ 45236944 (+)
LOC110526027 hspb8 coding upstream 236652 45155981 ~ 45178825 (+)
LOC110526025 srrm4 coding upstream 262492 45061658 ~ 45152985 (+)
LOC110526024 suds3 coding upstream 519495 44873385 ~ 44895982 (+)
LOC110526020 NA coding upstream 674905 44730067 ~ 44740687 (+)
si:dkey-174n20.1 LOC106584900 coding downstream 231266 45647734 ~ 45654067 (+)
LOC110526036 LOC106584896 coding downstream 396930 45813398 ~ 45837739 (+)
LOC110526902 NA coding downstream 456351 45872819 ~ 45873709 (+)
LOC118964875 NA coding downstream 483451 45899919 ~ 45901120 (+)
LOC110525032 NA coding downstream 541962 45958430 ~ 45959299 (+)
G512354 NA non-coding upstream 34781 45318114 ~ 45380696 (+)
G512316 NA non-coding upstream 146760 45268497 ~ 45268717 (+)
G512311 xbp1 non-coding upstream 160715 45251889 ~ 45254762 (+)
G512310 NA non-coding upstream 165266 45249992 ~ 45250211 (+)
G512308 NA non-coding upstream 167248 45247365 ~ 45248229 (+)
G512524 LOC107756720 non-coding downstream 169225 45585693 ~ 45586219 (+)
G512875 NA non-coding downstream 191187 45607655 ~ 45608138 (+)
G512879 NA non-coding downstream 193422 45609890 ~ 45610116 (+)
G512886 NA non-coding downstream 198476 45614944 ~ 45615211 (+)
G512889 NA non-coding downstream 200383 45616851 ~ 45617058 (+)
G512192 LOC106584908 other upstream 229608 45184439 ~ 45185869 (+)
G510416 NA other upstream 1756984 43657468 ~ 43658493 (+)
G509160 NA other upstream 2845308 42567105 ~ 42570169 (+)
G508559 dph7 other upstream 3283537 42129225 ~ 42131940 (+)
G512912 NA other downstream 219121 45635589 ~ 45636250 (+)
LOC110526042 LOC106584891 other downstream 770532 46076084 ~ 46190292 (+)
G513501 NA other downstream 943488 46359956 ~ 46360585 (+)
G513745 NA other downstream 1484093 46900561 ~ 46901123 (+)
G514464 NA other downstream 1510374 46926842 ~ 46927714 (+)

Expression


Co-expression Network