G512875


Basic Information

Item Value
gene id G512875
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 45607655 ~ 45608138 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU581887
gtgtctataaatgaattctctgagagtgcttacaaaacagttcttagtatcctttatagccaagacacaccgctctcaactcacatgacaaataacagatcttaggaTCATTACAAAGGGccttttacttgagagaggagtatcccatagccagatagaATTAGCTATACattattgttcagtttggtctcctaaacaaagttcttatctcgttcttggtacaacaTAGTCCAAACCTTttcctcatccaatggcatatatcaatggTCAATTCTATATACACCCATCTCAAATGGACAAGCTCACCGAGACAGTGAGCCTCTTAGATCATATGCTaggtcaagataagggcaacctcagaggggacatacaatagttacagacacattccccataagaagacaagcctccattctgtcctcctccccttctgatattcttcatagcatcacatggtttaacagatacattgacatatgaagac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU581887 True 484 lncRNA 0.40 1 45607655 45608138

Neighbor

gene id symbol gene type direction distance location
LOC110526028 ccdc60 coding upstream 370711 45187119 ~ 45236944 (+)
LOC110526027 hspb8 coding upstream 428830 45155981 ~ 45178825 (+)
LOC110526025 srrm4 coding upstream 454670 45061658 ~ 45152985 (+)
LOC110526024 suds3 coding upstream 711673 44873385 ~ 44895982 (+)
LOC110526020 NA coding upstream 867083 44730067 ~ 44740687 (+)
si:dkey-174n20.1 LOC106584900 coding downstream 39596 45647734 ~ 45654067 (+)
LOC110526036 LOC106584896 coding downstream 205260 45813398 ~ 45837739 (+)
LOC110526902 NA coding downstream 264681 45872819 ~ 45873709 (+)
LOC118964875 NA coding downstream 291781 45899919 ~ 45901120 (+)
LOC110525032 NA coding downstream 350292 45958430 ~ 45959299 (+)
G512524 LOC107756720 non-coding upstream 21436 45585693 ~ 45586219 (+)
G512392 NA non-coding upstream 158935 45379922 ~ 45448720 (+)
G512418 NA non-coding upstream 191187 45415477 ~ 45416468 (+)
G512354 NA non-coding upstream 226959 45318114 ~ 45380696 (+)
G512316 NA non-coding upstream 338938 45268497 ~ 45268717 (+)
G512879 NA non-coding downstream 1752 45609890 ~ 45610116 (+)
G512886 NA non-coding downstream 6806 45614944 ~ 45615211 (+)
G512889 NA non-coding downstream 8713 45616851 ~ 45617058 (+)
G512910 NA non-coding downstream 25122 45633260 ~ 45633734 (+)
G512911 NA non-coding downstream 25948 45634086 ~ 45634339 (+)
G512192 LOC106584908 other upstream 421786 45184439 ~ 45185869 (+)
G510416 NA other upstream 1949162 43657468 ~ 43658493 (+)
G509160 NA other upstream 3037486 42567105 ~ 42570169 (+)
G508559 dph7 other upstream 3475715 42129225 ~ 42131940 (+)
G512912 NA other downstream 27451 45635589 ~ 45636250 (+)
LOC110526042 LOC106584891 other downstream 578862 46076084 ~ 46190292 (+)
G513501 NA other downstream 751818 46359956 ~ 46360585 (+)
G513745 NA other downstream 1292423 46900561 ~ 46901123 (+)
G514464 NA other downstream 1318704 46926842 ~ 46927714 (+)

Expression


Co-expression Network