G512889


Basic Information

Item Value
gene id G512889
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 45616851 ~ 45617058 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU581901
gccaggtcccatctctTTTCTAACTCCTCGCAAGTGTGGCTTGTTTGGTGTCTGCTGTGAAGGAATACCACAAGTCAACTACTTGATTGATGAAGGCATGTCATCCAGCAAAGGcagcagcgcagtcatcaactATGTGCACCATTTCTTCTCCAACCATGGAGTTGGGAAAACACATGTGGACTTGAATTGTGATaactgcagtggc

Function

NR:

description
PREDICTED: uncharacterized protein LOC106561205

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU581901 True 208 lncRNA 0.47 1 45616851 45617058

Neighbor

gene id symbol gene type direction distance location
LOC110526028 ccdc60 coding upstream 379907 45187119 ~ 45236944 (+)
LOC110526027 hspb8 coding upstream 438026 45155981 ~ 45178825 (+)
LOC110526025 srrm4 coding upstream 463866 45061658 ~ 45152985 (+)
LOC110526024 suds3 coding upstream 720869 44873385 ~ 44895982 (+)
LOC110526020 NA coding upstream 876279 44730067 ~ 44740687 (+)
si:dkey-174n20.1 LOC106584900 coding downstream 30676 45647734 ~ 45654067 (+)
LOC110526036 LOC106584896 coding downstream 196340 45813398 ~ 45837739 (+)
LOC110526902 NA coding downstream 255761 45872819 ~ 45873709 (+)
LOC118964875 NA coding downstream 282861 45899919 ~ 45901120 (+)
LOC110525032 NA coding downstream 341372 45958430 ~ 45959299 (+)
G512886 NA non-coding upstream 1640 45614944 ~ 45615211 (+)
G512879 NA non-coding upstream 6735 45609890 ~ 45610116 (+)
G512875 NA non-coding upstream 8713 45607655 ~ 45608138 (+)
G512524 LOC107756720 non-coding upstream 30632 45585693 ~ 45586219 (+)
G512392 NA non-coding upstream 168131 45379922 ~ 45448720 (+)
G512910 NA non-coding downstream 16202 45633260 ~ 45633734 (+)
G512911 NA non-coding downstream 17028 45634086 ~ 45634339 (+)
G512913 NA non-coding downstream 19790 45636848 ~ 45637084 (+)
G512914 NA non-coding downstream 20309 45637367 ~ 45639448 (+)
G512916 NA non-coding downstream 25746 45642804 ~ 45643357 (+)
G512192 LOC106584908 other upstream 430982 45184439 ~ 45185869 (+)
G510416 NA other upstream 1958358 43657468 ~ 43658493 (+)
G509160 NA other upstream 3046682 42567105 ~ 42570169 (+)
G508559 dph7 other upstream 3484911 42129225 ~ 42131940 (+)
G512912 NA other downstream 18531 45635589 ~ 45636250 (+)
LOC110526042 LOC106584891 other downstream 569942 46076084 ~ 46190292 (+)
G513501 NA other downstream 742898 46359956 ~ 46360585 (+)
G513745 NA other downstream 1283503 46900561 ~ 46901123 (+)
G514464 NA other downstream 1309784 46926842 ~ 46927714 (+)

Expression


Co-expression Network