G512910


Basic Information

Item Value
gene id G512910
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 45633260 ~ 45633734 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU581922
acttaaatccatttgacctaatttcaacaacaaaaaacctctagaccacctttactctacacacagagatgcgtacaaagctctccctcaccctccatttggaaatctgaccataattctatcctcctgattcgtGCTTACAAgttaaaactaaagcaggaagcaccagtgacttggtcaataaagaagtggtcagattatgcagatgctaaactacaggactgttttgctagcacagactggaatatgttctgggattcttccgatgtcattgaggagtacaccacatgaGTCActtgcttcatcaataagtgcatcgattaCGTTGTACCCACAGTGACAGTaccgtacataccccaaccagaagccatggattacaggcaacatccgcactgagctaaagggtagagcggacgcttataagaaatcccactatgccctcagatgaacaatcaaacaggaaaagcatcaatac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU581922 True 475 lncRNA 0.43 1 45633260 45633734

Neighbor

gene id symbol gene type direction distance location
LOC110526028 ccdc60 coding upstream 396316 45187119 ~ 45236944 (+)
LOC110526027 hspb8 coding upstream 454435 45155981 ~ 45178825 (+)
LOC110526025 srrm4 coding upstream 480275 45061658 ~ 45152985 (+)
LOC110526024 suds3 coding upstream 737278 44873385 ~ 44895982 (+)
LOC110526020 NA coding upstream 892688 44730067 ~ 44740687 (+)
si:dkey-174n20.1 LOC106584900 coding downstream 14000 45647734 ~ 45654067 (+)
LOC110526036 LOC106584896 coding downstream 179664 45813398 ~ 45837739 (+)
LOC110526902 NA coding downstream 239085 45872819 ~ 45873709 (+)
LOC118964875 NA coding downstream 266185 45899919 ~ 45901120 (+)
LOC110525032 NA coding downstream 324696 45958430 ~ 45959299 (+)
G512889 NA non-coding upstream 16202 45616851 ~ 45617058 (+)
G512886 NA non-coding upstream 18049 45614944 ~ 45615211 (+)
G512879 NA non-coding upstream 23144 45609890 ~ 45610116 (+)
G512875 NA non-coding upstream 25122 45607655 ~ 45608138 (+)
G512524 LOC107756720 non-coding upstream 47041 45585693 ~ 45586219 (+)
G512911 NA non-coding downstream 352 45634086 ~ 45634339 (+)
G512913 NA non-coding downstream 3114 45636848 ~ 45637084 (+)
G512914 NA non-coding downstream 3633 45637367 ~ 45639448 (+)
G512916 NA non-coding downstream 9070 45642804 ~ 45643357 (+)
G512988 NA non-coding downstream 111215 45744949 ~ 45745157 (+)
G512192 LOC106584908 other upstream 447391 45184439 ~ 45185869 (+)
G510416 NA other upstream 1974767 43657468 ~ 43658493 (+)
G509160 NA other upstream 3063091 42567105 ~ 42570169 (+)
G508559 dph7 other upstream 3501320 42129225 ~ 42131940 (+)
G512912 NA other downstream 1855 45635589 ~ 45636250 (+)
LOC110526042 LOC106584891 other downstream 553266 46076084 ~ 46190292 (+)
G513501 NA other downstream 726222 46359956 ~ 46360585 (+)
G513745 NA other downstream 1266827 46900561 ~ 46901123 (+)
G514464 NA other downstream 1293108 46926842 ~ 46927714 (+)

Expression


Co-expression Network