G512930



Basic Information


Item Value
gene id G512930
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 45644947 ~ 45645532 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU581942
caggtggactggggacagcaaggagtcatcatgtcaggtagtcctggagcatggtcctagggctcaggtcctccgagagagagaaagaaagagagaaggagagaattagagaacgcacacttagattcacacaggacaccgaataggacaggagaagtactccagatataacaaactgaccctagccccccgacacataaactactgcagcataaatactggaggctgagacaggaggggtcaggagacactgtggccccatccgaggtcacccccggacagggccaaacaggaaggatataaccccacccactttgccaaagcacagccccca

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU581942 True 334 lncRNA 0.54 2 45644947 45645532

Neighbor


gene id symbol gene type direction distance location
kremen1 kremen1 coding downstream 91573 45437334 ~ 45553374 (-)
coq5 coq5 coding downstream 226103 45414975 ~ 45418844 (-)
znrf3 LOC106584905 coding downstream 260097 45270568 ~ 45384850 (-)
xbp1 xbp1 coding downstream 390113 45251886 ~ 45254834 (-)
trnaw-cca NA coding downstream 416469 45228407 ~ 45228478 (-)
LOC110526035 LOC105889509 coding upstream 10453 45655985 ~ 45743095 (-)
LOC118965028 NA coding upstream 120137 45765669 ~ 45774928 (-)
LOC110526037 LOC106584895 coding upstream 205698 45851230 ~ 45863241 (-)
LOC100136024 LOC100136024 coding upstream 258519 45904051 ~ 45907159 (-)
LOC110526038 LOC106584879 coding upstream 270240 45915772 ~ 45954751 (-)
G512929 NA non-coding downstream 479 45644269 ~ 45644468 (-)
G512927 NA non-coding downstream 4747 45639561 ~ 45640200 (-)
G512926 NA non-coding downstream 5530 45639179 ~ 45639417 (-)
G512923 NA non-coding downstream 14351 45629243 ~ 45630596 (-)
G512898 NA non-coding downstream 20701 45624030 ~ 45624246 (-)
G512925 NA non-coding upstream 3152 45648684 ~ 45649061 (-)
G513114 NA non-coding upstream 99670 45745202 ~ 45745404 (-)
G513122 NA non-coding upstream 106377 45751909 ~ 45752372 (-)
G513123 NA non-coding upstream 107135 45752667 ~ 45752895 (-)
nf2a nf2 other downstream 1433124 44209338 ~ 44272386 (-)
prodhb LOC100194675 other downstream 1696558 43940790 ~ 43955257 (-)
G510310 NA other downstream 2120839 43523714 ~ 43524108 (-)
G509952 NA other downstream 2519560 43124581 ~ 43125387 (-)
apba1a apba1 other upstream 714356 46263121 ~ 46360886 (-)
LOC110526044 LOC107699739 other upstream 725158 46367701 ~ 46430607 (-)
G514434 NA other upstream 1265126 46910658 ~ 46910950 (-)
G514777 NA other upstream 1370630 47016162 ~ 47016496 (-)
G515094 LOC106585477 other upstream 2329261 47974793 ~ 47976975 (-)

Expression



Co-expression Network