G513043 (LOC100136024)


Basic Information

Item Value
gene id G513043
gene name LOC100136024
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 45904093 ~ 45906563 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU582064
AGCACATAAGAATTTTAAATGTTTGCATGTATCAATGGATATGTGCAACATCAACAGAGCCAAATAAATACATTGATAAATAAGTATAAATTACTGAATTATAGATATATTAATAAATAGTAGAACAATAGTGACTTAGTTTTCGTTTTAAGCATATTTTGATTATATCAGGGGCGCTTACCACAATATTGACTACGTCAATACACCCCAATGGTAACATGCTGTACTCGGTACATACTCTAAACCTCATGAAATTCTTGTGTCTTACAAGCAATACACTTAAATCTGTTGATGTGCGTGCACCCACAGTGGCAACCCAGTCCTGATCACAGAGGCCCAATAGAATCACATGAATTGTAGAGGATCTCTATTGGAGGCCTTGGCCTCCTGACTGGTGTTGTGTCAGTGTTTGCGGCCATCTTAGTTGTGGCGCTGGATGGTGAAGGTGGTAAGGCGGTTGGGGGCTGCCTTCTGACACATGTCCACCGGTTTGGTGTAGTCCTGCTGCATGTCCGTGCTGATGAACCAGTTCCTGAAACTGGCAGACTCCAGGGTACTGATGTCAACCCCGGTGTTCCGTCTGTAGAAAAGGAAACGCACCATGTCGCTCTGCTGGCTGATGGACTTCAGCTGATCCTTGTCCGCAAcctcCTAGGTGCAGGGTGGGCCTGCCTCCCGATTTGGAGCAGGACAGGTAGAGGTTGGATCCCTTTATGCCTAGGGCTACAGGTCTGGCTTCAGTCTCAATGGGGACGGGCGTGACGTACGAAGACAGGTTCAAATGCaCTTTGTGGTAGCTGCTGCCTCCCTGGAGCATCATGGCGTGCAGCTCCATAGCCTCATTCATCAGGACCCAGCACTTGTTCTCAGAGTCAGTGACGCTACACTCATACTGTGATGTACTGCTGAACCCTGCTGCCCTCCTGCTCGCTGGGGGTGCCGACTCCAACTCCAACACTATATGTTCTTCCACAGCACTCTCCAGCAAGAAGTTGAGCAGGTCCTTGTCCTTGAACTCGGTTCCCATGGTAACCCCCTCGCCACCCTTTAACCTCTCCATGGCGATGATGAGGTTGGCAATGTGACGCATGGTGATGGGGTGATGGGATACCTCCAGATCCAGACCCTGAGGCAGCTTGGAGCTCCATG

Function

NR:

description
interleukin-1 beta

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU582064 True 1149 lncRNA 0.49 4 45904093 45906563

Neighbor

gene id symbol gene type direction distance location
LOC118964875 NA coding upstream 2973 45899919 ~ 45901120 (+)
LOC110526902 NA coding upstream 30384 45872819 ~ 45873709 (+)
LOC110526036 LOC106584896 coding upstream 66354 45813398 ~ 45837739 (+)
si:dkey-174n20.1 LOC106584900 coding upstream 250026 45647734 ~ 45654067 (+)
LOC110526028 ccdc60 coding upstream 667149 45187119 ~ 45236944 (+)
LOC110525032 NA coding downstream 51867 45958430 ~ 45959299 (+)
LOC110526904 NA coding downstream 61901 45968464 ~ 45972013 (+)
LOC110526042 LOC106584891 coding downstream 169521 46076084 ~ 46190292 (+)
LOC110526905 LOC106584888 coding downstream 292956 46199519 ~ 46263098 (+)
ascc2 ascc2 coding downstream 539393 46445956 ~ 46461957 (+)
G513033 NA non-coding upstream 40910 45851233 ~ 45863183 (+)
G513030 NA non-coding upstream 95854 45808015 ~ 45808239 (+)
G513024 NA non-coding upstream 106285 45797501 ~ 45797808 (+)
G513021 NA non-coding upstream 110308 45790666 ~ 45793785 (+)
G512988 NA non-coding upstream 158936 45744949 ~ 45745157 (+)
G513363 NA non-coding downstream 226635 46133198 ~ 46141623 (+)
G513377 NA non-coding downstream 286865 46193428 ~ 46193656 (+)
G513379 NA non-coding downstream 288675 46195238 ~ 46195439 (+)
G513380 NA non-coding downstream 289213 46195776 ~ 46196008 (+)
G512912 NA other upstream 267843 45635589 ~ 45636250 (+)
G512192 LOC106584908 other upstream 718224 45184439 ~ 45185869 (+)
G510416 NA other upstream 2245600 43657468 ~ 43658493 (+)
G509160 NA other upstream 3333924 42567105 ~ 42570169 (+)
G513501 NA other downstream 453393 46359956 ~ 46360585 (+)
G513745 NA other downstream 993998 46900561 ~ 46901123 (+)
G514464 NA other downstream 1020279 46926842 ~ 46927714 (+)
G514499 NA other downstream 1115731 47022294 ~ 47023092 (+)

Expression


Co-expression Network