Gene
RNA
| Item | Value |
|---|---|
| gene id | G513944 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 46170054 ~ 46170303 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| tight junction protein ZO-2-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU583032 | True | 250 | lncRNA | 0.44 | 1 | 46170054 | 46170303 |
46,167,200
46,167,600
46,168,000
46,168,400
46,168,800
46,169,200
46,169,200
46,169,600
46,170,000
46,170,400
46,170,800
46,171,200
NC_048570.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526039 | NA | coding | downstream | 174668 | 45973773 ~ 45995386 (-) |
| LOC110526038 | LOC106584879 | coding | downstream | 215303 | 45915772 ~ 45954751 (-) |
| LOC100136024 | LOC100136024 | coding | downstream | 262895 | 45904051 ~ 45907159 (-) |
| LOC110526037 | LOC106584895 | coding | downstream | 306813 | 45851230 ~ 45863241 (-) |
| LOC118965028 | NA | coding | downstream | 395126 | 45765669 ~ 45774928 (-) |
| apba1a | apba1 | coding | upstream | 92818 | 46263121 ~ 46360886 (-) |
| LOC110526044 | LOC107699739 | coding | upstream | 197398 | 46367701 ~ 46430607 (-) |
| rnf215 | rnf215 | coding | upstream | 291060 | 46461363 ~ 46471132 (-) |
| LOC110526055 | samd3 | coding | upstream | 806092 | 46971364 ~ 46980777 (-) |
| utp15 | utp15 | coding | upstream | 875190 | 47045493 ~ 47056805 (-) |
| G513943 | NA | non-coding | downstream | 526 | 46169316 ~ 46169528 (-) |
| G513942 | NA | non-coding | downstream | 1053 | 46168790 ~ 46169001 (-) |
| G513941 | NA | non-coding | downstream | 2068 | 46167782 ~ 46167986 (-) |
| G513940 | NA | non-coding | downstream | 3258 | 46166590 ~ 46166796 (-) |
| G513925 | NA | non-coding | downstream | 29999 | 46138158 ~ 46140055 (-) |
| G513945 | NA | non-coding | upstream | 373 | 46170676 ~ 46170969 (-) |
| G513947 | NA | non-coding | upstream | 968 | 46171271 ~ 46171612 (-) |
| G513949 | LOC106584891 | non-coding | upstream | 3429 | 46173732 ~ 46173952 (-) |
| G513950 | NA | non-coding | upstream | 4484 | 46174787 ~ 46175056 (-) |
| G513951 | NA | non-coding | upstream | 5463 | 46175766 ~ 46175965 (-) |
| znrf3 | LOC106584905 | other | downstream | 893667 | 45270568 ~ 45384850 (-) |
| nf2a | nf2 | other | downstream | 1958231 | 44209338 ~ 44272386 (-) |
| prodhb | LOC100194675 | other | downstream | 2221665 | 43940790 ~ 43955257 (-) |
| G510310 | NA | other | downstream | 2645946 | 43523714 ~ 43524108 (-) |
| G509952 | NA | other | downstream | 3044667 | 43124581 ~ 43125387 (-) |
| G514434 | NA | other | upstream | 740355 | 46910658 ~ 46910950 (-) |
| G514777 | NA | other | upstream | 845859 | 47016162 ~ 47016496 (-) |
| G515094 | LOC106585477 | other | upstream | 1804490 | 47974793 ~ 47976975 (-) |
