G513619


Basic Information

Item Value
gene id G513619
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 46646968 ~ 46697374 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU582694
gggtatgtctctatcagttttgcacatcgagagactgacatttttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagaccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaatttgaaccatcttccctgtccctgctgaagaaaagcaggcccaaaccatgatgctgccaccaccatgtttgacagtggggatggtgtgttcagggtaatgagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagttcaattttggtttcatctgaccagagcaccttctacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaacaacattttttatggatatctttaagaaatggctttcttcttgccactcttccataaaggccagatttgtgcaatatacaactgattgttgtcctatggacagagtctcccaactcagctgtagatctctgcagttcatccagag

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU582694 True 720 lncRNA 0.43 2 46646968 46697374

Neighbor

gene id symbol gene type direction distance location
LOC110526049 LOC106570833 coding upstream 79333 46542604 ~ 46567635 (+)
LOC110526048 sec14l2 coding upstream 132212 46471484 ~ 46514756 (+)
ascc2 ascc2 coding upstream 185011 46445956 ~ 46461957 (+)
LOC110526905 LOC106584888 coding upstream 383870 46199519 ~ 46263098 (+)
LOC110526042 LOC106584891 coding upstream 456676 46076084 ~ 46190292 (+)
rasgrf2b rasgrf2 coding downstream 25586 46722960 ~ 46900004 (+)
LOC118964876 NA coding downstream 233710 46931084 ~ 46935277 (+)
LOC110526054 NA coding downstream 260128 46935543 ~ 46978128 (+)
LOC110526907 NA coding downstream 296222 46993596 ~ 47004352 (+)
si:dkey-88e18.2 il12b coding downstream 413438 47110812 ~ 47119011 (+)
G513523 NA non-coding upstream 130809 46491404 ~ 46516159 (+)
G513502 NA non-coding upstream 279113 46367652 ~ 46367855 (+)
G513427 NA non-coding upstream 379435 46263122 ~ 46267533 (+)
G513380 NA non-coding upstream 450960 46195776 ~ 46196008 (+)
G513379 NA non-coding upstream 451529 46195238 ~ 46195439 (+)
G513746 NA non-coding downstream 204176 46901550 ~ 46903598 (+)
G513748 NA non-coding downstream 208315 46905689 ~ 46905904 (+)
G513749 NA non-coding downstream 209147 46906521 ~ 46906796 (+)
G514426 NA non-coding downstream 209740 46907114 ~ 46907423 (+)
G514427 LOC100380853 non-coding downstream 210503 46907877 ~ 46908171 (+)
G513501 NA other upstream 286383 46359956 ~ 46360585 (+)
G512912 NA other upstream 1010718 45635589 ~ 45636250 (+)
LOC110526028 ccdc60 other upstream 1426186 45187119 ~ 45236944 (+)
G512192 LOC106584908 other upstream 1461099 45184439 ~ 45185869 (+)
G513745 NA other downstream 203187 46900561 ~ 46901123 (+)
G514464 NA other downstream 229468 46926842 ~ 46927714 (+)
G514499 NA other downstream 324920 47022294 ~ 47023092 (+)
G514662 LOC106597055 other downstream 605809 47303183 ~ 47329244 (+)
G514665 NA other downstream 609064 47306438 ~ 47320050 (+)

Expression


Co-expression Network