G513745


Basic Information

Item Value
gene id G513745
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 46900561 ~ 46901123 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU582823
aagaggcccatgatcactctggatgaactgcagagatctacagctgagctgggagactctgtccataggacaacaaacagtcgtatattgcacaaatctggcctttatggaagagtggcaagaagaaagccatttcttaaagatatccataaaaaatgtagtttaaagtttgtcacaagccacctgggagacacaccaaacatgtggaagaaggtgctctggtcagatgaaaccaaaattgaactttttggcaacaatgcaaaacgttatgtttggcgtaaaagcaacacagctcatcaccctgatcacaccatccccactgtcaaacatggtggtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatggttaaaattgatgggaagatggatggagccaaatacaggaccattctggaagaaaacctgatgcagtctgcaaaagacctgagactgggacggagatttgtcttccaacaagacaatgatccaaaacataaagcaaaatctacaatggaatggttcaaaaataaacatatccaggt

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU582823 True 563 TUCP 0.43 1 46900561 46901123

Neighbor

gene id symbol gene type direction distance location
rasgrf2b rasgrf2 coding upstream 557 46722960 ~ 46900004 (+)
msh3 LOC106584876 coding upstream 191599 46574935 ~ 46708962 (+)
LOC110526049 LOC106570833 coding upstream 332926 46542604 ~ 46567635 (+)
LOC110526048 sec14l2 coding upstream 385805 46471484 ~ 46514756 (+)
ascc2 ascc2 coding upstream 438604 46445956 ~ 46461957 (+)
LOC118964876 NA coding downstream 29961 46931084 ~ 46935277 (+)
LOC110526054 NA coding downstream 56379 46935543 ~ 46978128 (+)
LOC110526907 NA coding downstream 92473 46993596 ~ 47004352 (+)
si:dkey-88e18.2 il12b coding downstream 209689 47110812 ~ 47119011 (+)
LOC110526052 hic2 coding downstream 249777 47150900 ~ 47217434 (+)
G513619 NA non-coding upstream 203187 46646968 ~ 46697374 (+)
G513523 NA non-coding upstream 384402 46491404 ~ 46516159 (+)
G513502 NA non-coding upstream 532706 46367652 ~ 46367855 (+)
G513427 NA non-coding upstream 633028 46263122 ~ 46267533 (+)
G513380 NA non-coding upstream 704553 46195776 ~ 46196008 (+)
G513746 NA non-coding downstream 427 46901550 ~ 46903598 (+)
G513748 NA non-coding downstream 4566 46905689 ~ 46905904 (+)
G513749 NA non-coding downstream 5398 46906521 ~ 46906796 (+)
G514426 NA non-coding downstream 5991 46907114 ~ 46907423 (+)
G514427 LOC100380853 non-coding downstream 6754 46907877 ~ 46908171 (+)
G513501 NA other upstream 539976 46359956 ~ 46360585 (+)
LOC110526042 LOC106584891 other upstream 710269 46076084 ~ 46190292 (+)
G512912 NA other upstream 1264311 45635589 ~ 45636250 (+)
LOC110526028 ccdc60 other upstream 1679779 45187119 ~ 45236944 (+)
G512192 LOC106584908 other upstream 1714692 45184439 ~ 45185869 (+)
G514464 NA other downstream 25719 46926842 ~ 46927714 (+)
G514499 NA other downstream 121171 47022294 ~ 47023092 (+)
G514662 LOC106597055 other downstream 402060 47303183 ~ 47329244 (+)
G514665 NA other downstream 405315 47306438 ~ 47320050 (+)
LOC118964881 LOC106585521 other downstream 612663 47425001 ~ 47519480 (+)

Expression


Co-expression Network