G513748


Basic Information

Item Value
gene id G513748
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 46905689 ~ 46905904 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU582826
gataattgtacgtgtggggtacagagatgaggtagtcaatccaaaaatcatgttaaacactattattgcacacagagtgagtccatgtgacttacagtgaggcaaaaaagtatttagtcagccaccaattgtgcaagttctcccacttaaaaagatgagagaggcctgtaattttcatcataggtacacttcaactatgacagacaaaatgagggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU582826 True 216 lncRNA 0.39 1 46905689 46905904

Neighbor

gene id symbol gene type direction distance location
rasgrf2b rasgrf2 coding upstream 5685 46722960 ~ 46900004 (+)
msh3 LOC106584876 coding upstream 196727 46574935 ~ 46708962 (+)
LOC110526049 LOC106570833 coding upstream 338054 46542604 ~ 46567635 (+)
LOC110526048 sec14l2 coding upstream 390933 46471484 ~ 46514756 (+)
ascc2 ascc2 coding upstream 443732 46445956 ~ 46461957 (+)
LOC118964876 NA coding downstream 25180 46931084 ~ 46935277 (+)
LOC110526054 NA coding downstream 51598 46935543 ~ 46978128 (+)
LOC110526907 NA coding downstream 87692 46993596 ~ 47004352 (+)
si:dkey-88e18.2 il12b coding downstream 204908 47110812 ~ 47119011 (+)
LOC110526052 hic2 coding downstream 244996 47150900 ~ 47217434 (+)
G513746 NA non-coding upstream 2091 46901550 ~ 46903598 (+)
G513619 NA non-coding upstream 208315 46646968 ~ 46697374 (+)
G513523 NA non-coding upstream 389530 46491404 ~ 46516159 (+)
G513502 NA non-coding upstream 537834 46367652 ~ 46367855 (+)
G513427 NA non-coding upstream 638156 46263122 ~ 46267533 (+)
G513749 NA non-coding downstream 617 46906521 ~ 46906796 (+)
G514426 NA non-coding downstream 1210 46907114 ~ 46907423 (+)
G514427 LOC100380853 non-coding downstream 1973 46907877 ~ 46908171 (+)
G514433 NA non-coding downstream 4629 46910533 ~ 46910911 (+)
G514436 NA non-coding downstream 6698 46912602 ~ 46912854 (+)
G513745 NA other upstream 4566 46900561 ~ 46901123 (+)
G513501 NA other upstream 545104 46359956 ~ 46360585 (+)
LOC110526042 LOC106584891 other upstream 715397 46076084 ~ 46190292 (+)
G512912 NA other upstream 1269439 45635589 ~ 45636250 (+)
LOC110526028 ccdc60 other upstream 1684907 45187119 ~ 45236944 (+)
G514464 NA other downstream 20938 46926842 ~ 46927714 (+)
G514499 NA other downstream 116390 47022294 ~ 47023092 (+)
G514662 LOC106597055 other downstream 397279 47303183 ~ 47329244 (+)
G514665 NA other downstream 400534 47306438 ~ 47320050 (+)
LOC118964881 LOC106585521 other downstream 607882 47425001 ~ 47519480 (+)

Expression


Co-expression Network