G514449


Basic Information

Item Value
gene id G514449
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 46919624 ~ 46920554 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU583572
gagatacacagagagagagagacacagagagagagacacacacacagagagagagatacacagagagagagagacacacacagagggagacacatgaagagagagagagacacacaggagagagagatacatagagagtgaaacacagatagagagacacacacagaaagacagagagagagagagagagagaggaagaggggga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU583572 True 205 lncRNA 0.48 2 46919624 46920554

Neighbor

gene id symbol gene type direction distance location
rasgrf2b rasgrf2 coding upstream 19620 46722960 ~ 46900004 (+)
msh3 LOC106584876 coding upstream 210662 46574935 ~ 46708962 (+)
LOC110526049 LOC106570833 coding upstream 351989 46542604 ~ 46567635 (+)
LOC110526048 sec14l2 coding upstream 404868 46471484 ~ 46514756 (+)
ascc2 ascc2 coding upstream 457667 46445956 ~ 46461957 (+)
LOC118964876 NA coding downstream 10530 46931084 ~ 46935277 (+)
LOC110526054 NA coding downstream 36948 46935543 ~ 46978128 (+)
LOC110526907 NA coding downstream 73042 46993596 ~ 47004352 (+)
si:dkey-88e18.2 il12b coding downstream 190258 47110812 ~ 47119011 (+)
LOC110526052 hic2 coding downstream 230346 47150900 ~ 47217434 (+)
G514440 NA non-coding upstream 4364 46914969 ~ 46915260 (+)
G514436 NA non-coding upstream 6770 46912602 ~ 46912854 (+)
G514433 NA non-coding upstream 8713 46910533 ~ 46910911 (+)
G514427 LOC100380853 non-coding upstream 11453 46907877 ~ 46908171 (+)
G514426 NA non-coding upstream 12201 46907114 ~ 46907423 (+)
G514460 NA non-coding downstream 8844 46929398 ~ 46929786 (+)
G514465 NA non-coding downstream 11648 46932202 ~ 46933128 (+)
G514453 NA non-coding downstream 13239 46933793 ~ 46998665 (+)
G514459 NA non-coding downstream 48370 46968924 ~ 46973262 (+)
G513745 NA other upstream 18501 46900561 ~ 46901123 (+)
G513501 NA other upstream 559039 46359956 ~ 46360585 (+)
LOC110526042 LOC106584891 other upstream 729332 46076084 ~ 46190292 (+)
G512912 NA other upstream 1283374 45635589 ~ 45636250 (+)
LOC110526028 ccdc60 other upstream 1698842 45187119 ~ 45236944 (+)
G514464 NA other downstream 6288 46926842 ~ 46927714 (+)
G514499 NA other downstream 101740 47022294 ~ 47023092 (+)
G514662 LOC106597055 other downstream 382629 47303183 ~ 47329244 (+)
G514665 NA other downstream 385884 47306438 ~ 47320050 (+)
LOC118964881 LOC106585521 other downstream 593232 47425001 ~ 47519480 (+)

Expression


Co-expression Network