G514776


Basic Information

Item Value
gene id G514776
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 47010761 ~ 47011827 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU583953
GCTGACTTCTTGAATTCTGAATTCATTTAGACAACCATTTGACTTCGGGTAAATTGACACCTGACTCAAATTACTTAAAAGATTCTAACTTGTTGGATCTGAGAAGTAACTCTCCGATATACCGTTTAACTATCGAACAGCTGATGCAAATATATCCAGAGAGTTCTCTGTAGCCTCTAGATTGAGCTCAGCATCTCGACCTCGTTGCGAGCCACTGACACTGCGGTAGTTCAACGGGTTTAACTATTGAACAGTTGTTTTGTCGCTTTGCGCCAGGTACGTGGGTGCTGATGCAAATATATCCAGAGAGTTCTCTGTATCCTCTCGATTGAGCTCAGTATCGCGACCTCGTTGCGGACACAGACTTTTTGGTATTCCATTTGGGGCAGGGAATCACCAGCGGGTTCTCCCATCCGAGCCAAACTTGAATCTCTCAATTTAGTAAAGCACCGACTTCAAGTCAACctctcagccagtagaggggagtcGCTACTAACTAAATTAAAAAATAACTCTGACCGATTGAAACTCTGCTCCTGATCTCGTGGGTCTCCTCGTCATCTCTCAAAGGTAATTAAATAACTATTATAAGTATTTAAATATAGAGATAAGTGTTATCATTGTACCAGGCATTTTATAAGAGCATTAAGTCATTTGCATGTTTTTGATTAACGCTGTGTGTGACCGAGTAACAAATTGTGTATTTTGAAGTGTGTTTGATTGTAAAAGACAAAAAACAGAGTGTTTTCAAAAATAAACGGTAGTCTTATTTTGTCTCGAGAAAAAAGTTCTCTCAAAGACAGTTAACGGCACGGGAGATAACAACTCTGACACTCCCCGCTACCGGGACACTGGAAACGGGGATCAATGCTCTATG
>TU583950
GCTGACTTCTTGAATTCTGAATTCATTTAGACAACCATTTGACTTCGGGTAAATTGACACCTGACTCAAATTACTTAAAAGATTCTAACTTGTTGGATCTGAGAAGTAACTCTCCGATATACCGTTTAACTATCGAACAGCTGTTTTGTCGCTTTGCGCCAGGTACGTGGGTGCTGATGCAAATATATCCAGAGAGTTCTCTGTAGCCTCTCGATTGAGCTCAGCATCTCTACCTCGTTGCGAGCCACTGACACTGCGGTAGTTCAACGGGGTTGAGAGACACTCTAGTCCTTAAGGTTATCCCTTGCTTTCTCTTATGGATGTCTGAATTGACCCTGTGGTTTTGCGCCAGGTACGTGGGTGCTGATGCAAATATATCCAGAGAGTTCTCTGTATCCTCTCGATTGAGCTCAGTATCGCGACCTCGTTGCGGACACAGACTTTTTGGTATTCCATTTGGGGCAGGGAATCACCAGCGGGTTCTCCCATCCGAGCCAAACTTGAATCTCTCAATTTAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU583953 False 877 lncRNA 0.41 2 47010761 47011827
TU583950 True 519 lncRNA 0.46 2 47011195 47011827

Neighbor

gene id symbol gene type direction distance location
LOC110526055 samd3 coding downstream 29984 46971364 ~ 46980777 (-)
rnf215 rnf215 coding downstream 539629 46461363 ~ 46471132 (-)
LOC110526044 LOC107699739 coding downstream 580154 46367701 ~ 46430607 (-)
apba1a apba1 coding downstream 650779 46263121 ~ 46360886 (-)
LOC110526039 NA coding downstream 1015375 45973773 ~ 45995386 (-)
utp15 utp15 coding upstream 33666 47045493 ~ 47056805 (-)
LOC118965029 NA coding upstream 335007 47346834 ~ 47349012 (-)
LOC118965030 NA coding upstream 339884 47351711 ~ 47353889 (-)
LOC118964878 LOC106585477 coding upstream 495336 47507163 ~ 47511010 (-)
LOC118964883 LOC106585477 coding upstream 521989 47533816 ~ 47534526 (-)
G514769 NA non-coding downstream 6404 47004110 ~ 47004357 (-)
G514766 NA non-coding downstream 17474 46957198 ~ 46993287 (-)
G514747 NA non-coding downstream 80731 46929809 ~ 46930030 (-)
G514744 NA non-coding downstream 82430 46927999 ~ 46928331 (-)
G514740 NA non-coding upstream 22003 47033830 ~ 47035938 (-)
G514741 NA non-coding upstream 31140 47042967 ~ 47043364 (-)
G514787 NA non-coding upstream 49082 47060909 ~ 47061207 (-)
G514788 NA non-coding upstream 51381 47063208 ~ 47070086 (-)
G514804 NA non-coding upstream 76648 47088475 ~ 47088734 (-)
G514434 NA other downstream 99811 46910658 ~ 46910950 (-)
znrf3 LOC106584905 other downstream 1734374 45270568 ~ 45384850 (-)
nf2a nf2 other downstream 2798938 44209338 ~ 44272386 (-)
G514777 NA other upstream 4335 47016162 ~ 47016496 (-)
G515094 LOC106585477 other upstream 962966 47974793 ~ 47976975 (-)
G515122 LOC106585477 other upstream 1252166 48263993 ~ 48264977 (-)
LOC110512142 LOC106585477 other upstream 1281019 48292846 ~ 48318495 (-)
G515139 LOC106585477 other upstream 1307920 48319747 ~ 48320588 (-)

Expression


Co-expression Network