G514493


Basic Information

Item Value
gene id G514493
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 47016610 ~ 47016813 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU583622
TTCTGTGGCTGACGCACTGGTGGTATCCATTTCTCTAGAGGGTTGGGGAGCTGCAGTTCCGTTTACTGGGTTGCTTGTTATGGCGGTAGTTAAAGGAGTGCGGTTGATGCTCACTGTGGTAGGCCAGGTTGTGGTGTTTAAAACAACACTGGGGTTGTGACAAACCACGTCCTCCCAAGGCTCACTATCTGTGCTTTGTTCGTA

Function

NR:

description
uncharacterized protein LOC110526051

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU583622 True 204 lncRNA 0.50 1 47016610 47016813

Neighbor

gene id symbol gene type direction distance location
LOC110526907 NA coding upstream 12258 46993596 ~ 47004352 (+)
LOC110526054 NA coding upstream 38482 46935543 ~ 46978128 (+)
LOC118964876 NA coding upstream 81333 46931084 ~ 46935277 (+)
rasgrf2b rasgrf2 coding upstream 116606 46722960 ~ 46900004 (+)
msh3 LOC106584876 coding upstream 307648 46574935 ~ 46708962 (+)
si:dkey-88e18.2 il12b coding downstream 93999 47110812 ~ 47119011 (+)
LOC110526052 hic2 coding downstream 134087 47150900 ~ 47217434 (+)
LOC118964877 NA coding downstream 378554 47395367 ~ 47398426 (+)
LOC110526909 LOC106585521 coding downstream 404428 47421241 ~ 47424219 (+)
LOC110526910 LOC106585521 coding downstream 434032 47450664 ~ 47494972 (+)
G514487 NA non-coding upstream 10413 47005841 ~ 47006197 (+)
G514486 NA non-coding upstream 10946 47005306 ~ 47005664 (+)
G514453 NA non-coding upstream 17945 46933793 ~ 46998665 (+)
G514494 NA non-coding downstream 174 47016987 ~ 47017236 (+)
G514495 NA non-coding downstream 497 47017310 ~ 47017547 (+)
G514496 NA non-coding downstream 1434 47018247 ~ 47018559 (+)
G514457 NA non-coding downstream 17060 47033873 ~ 47040194 (+)
G514461 NA non-coding downstream 24175 47040988 ~ 47041441 (+)
G514464 NA other upstream 88896 46926842 ~ 46927714 (+)
G513745 NA other upstream 115487 46900561 ~ 46901123 (+)
G513501 NA other upstream 656025 46359956 ~ 46360585 (+)
LOC110526042 LOC106584891 other upstream 826318 46076084 ~ 46190292 (+)
G512912 NA other upstream 1380360 45635589 ~ 45636250 (+)
G514499 NA other downstream 5481 47022294 ~ 47023092 (+)
G514662 LOC106597055 other downstream 286370 47303183 ~ 47329244 (+)
G514665 NA other downstream 289625 47306438 ~ 47320050 (+)
LOC118964881 LOC106585521 other downstream 496973 47425001 ~ 47519480 (+)
G515069 NA other downstream 933193 47950006 ~ 47952254 (+)

Expression


Co-expression Network