G514499


Basic Information

Item Value
gene id G514499
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 47022294 ~ 47023092 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU583628
acttcagtcagcacagacccagacaacagtccagtacaacaacagccccttaaccagacccggagagctggaggtggacagagacatatctgcactctggacagtggtgagacaacttcaacaggagaaagagcaggatcaggagaagaacagagcactagaggagaggatcagactgctggtggaggagaggttgagggggatggaggagagggtgagggggacggaggagaggttgagggggacggcgtgtgacagagaacaacccactagagaggtggctacccccacagagaagccagcagaacagcccacctcagcacccaacaaaagtctcgacaccacagcagaacagtccacaccagaccctgaccatagagtcgacaccacagcagaacagtccacaccagaccatgaccatagagtcgacatcacagcagaacagacaaatgaagaaccccaagcccagaggctctcaccccctctgagcaccccccctgtcagccaccctgatagcccttttgacaacccccccacacccactgaggacaaacacaagacacagattgtactacttatggactcaaatgggaaatatatagaagaaaaaaaactttttcccaaacacagtgtgtctaaactctggtgtccaaacacccagcgcgccctagaccttctgtctgaggccaaactaggctcacccagccacataataatacacacaggcacaaacgacctgagagcacagcaggaaagagtggccacagcactgaagggagtgattgaaaaggcttcttct

Function

NR:

description
PREDICTED: uncharacterized protein LOC107705643

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU583628 True 799 TUCP 0.53 1 47022294 47023092

Neighbor

gene id symbol gene type direction distance location
LOC110526907 NA coding upstream 17942 46993596 ~ 47004352 (+)
LOC110526054 NA coding upstream 44166 46935543 ~ 46978128 (+)
LOC118964876 NA coding upstream 87017 46931084 ~ 46935277 (+)
rasgrf2b rasgrf2 coding upstream 122290 46722960 ~ 46900004 (+)
msh3 LOC106584876 coding upstream 313332 46574935 ~ 46708962 (+)
si:dkey-88e18.2 il12b coding downstream 87720 47110812 ~ 47119011 (+)
LOC110526052 hic2 coding downstream 127808 47150900 ~ 47217434 (+)
LOC118964877 NA coding downstream 372275 47395367 ~ 47398426 (+)
LOC110526909 LOC106585521 coding downstream 398149 47421241 ~ 47424219 (+)
LOC110526910 LOC106585521 coding downstream 427753 47450664 ~ 47494972 (+)
G514496 NA non-coding upstream 3735 47018247 ~ 47018559 (+)
G514495 NA non-coding upstream 4747 47017310 ~ 47017547 (+)
G514494 NA non-coding upstream 5058 47016987 ~ 47017236 (+)
G514493 NA non-coding upstream 5481 47016610 ~ 47016813 (+)
G514487 NA non-coding upstream 16097 47005841 ~ 47006197 (+)
G514457 NA non-coding downstream 10781 47033873 ~ 47040194 (+)
G514461 NA non-coding downstream 17896 47040988 ~ 47041441 (+)
G514530 NA non-coding downstream 55581 47078673 ~ 47078880 (+)
G514541 NA non-coding downstream 80260 47103352 ~ 47103562 (+)
G514545 NA non-coding downstream 85141 47108233 ~ 47181067 (+)
G514464 NA other upstream 94580 46926842 ~ 46927714 (+)
G513745 NA other upstream 121171 46900561 ~ 46901123 (+)
G513501 NA other upstream 661709 46359956 ~ 46360585 (+)
LOC110526042 LOC106584891 other upstream 832002 46076084 ~ 46190292 (+)
G512912 NA other upstream 1386044 45635589 ~ 45636250 (+)
G514662 LOC106597055 other downstream 280091 47303183 ~ 47329244 (+)
G514665 NA other downstream 283346 47306438 ~ 47320050 (+)
LOC118964881 LOC106585521 other downstream 490694 47425001 ~ 47519480 (+)
G515069 NA other downstream 926914 47950006 ~ 47952254 (+)
G515189 LOC100135962 other downstream 1528527 48532377 ~ 48587888 (+)

Expression


Co-expression Network