Gene
RNA
| Item | Value |
|---|---|
| gene id | G514461 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 47040988 ~ 47041441 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU583589 | True | 454 | lncRNA | 0.39 | 1 | 47040988 | 47041441 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526907 | NA | coding | upstream | 36636 | 46993596 ~ 47004352 (+) |
| LOC110526054 | NA | coding | upstream | 62860 | 46935543 ~ 46978128 (+) |
| LOC118964876 | NA | coding | upstream | 105711 | 46931084 ~ 46935277 (+) |
| rasgrf2b | rasgrf2 | coding | upstream | 140984 | 46722960 ~ 46900004 (+) |
| msh3 | LOC106584876 | coding | upstream | 332026 | 46574935 ~ 46708962 (+) |
| si:dkey-88e18.2 | il12b | coding | downstream | 69371 | 47110812 ~ 47119011 (+) |
| LOC110526052 | hic2 | coding | downstream | 109459 | 47150900 ~ 47217434 (+) |
| LOC118964877 | NA | coding | downstream | 353926 | 47395367 ~ 47398426 (+) |
| LOC110526909 | LOC106585521 | coding | downstream | 379800 | 47421241 ~ 47424219 (+) |
| LOC110526910 | LOC106585521 | coding | downstream | 409404 | 47450664 ~ 47494972 (+) |
| G514457 | NA | non-coding | upstream | 794 | 47033873 ~ 47040194 (+) |
| G514496 | NA | non-coding | upstream | 22429 | 47018247 ~ 47018559 (+) |
| G514495 | NA | non-coding | upstream | 23441 | 47017310 ~ 47017547 (+) |
| G514494 | NA | non-coding | upstream | 23752 | 47016987 ~ 47017236 (+) |
| G514493 | NA | non-coding | upstream | 24175 | 47016610 ~ 47016813 (+) |
| G514530 | NA | non-coding | downstream | 37232 | 47078673 ~ 47078880 (+) |
| G514541 | NA | non-coding | downstream | 61911 | 47103352 ~ 47103562 (+) |
| G514545 | NA | non-coding | downstream | 66792 | 47108233 ~ 47181067 (+) |
| G514614 | NA | non-coding | downstream | 196051 | 47237492 ~ 47237777 (+) |
| G514628 | NA | non-coding | downstream | 214240 | 47255681 ~ 47256160 (+) |
| G514499 | NA | other | upstream | 17896 | 47022294 ~ 47023092 (+) |
| G514464 | NA | other | upstream | 113274 | 46926842 ~ 46927714 (+) |
| G513745 | NA | other | upstream | 139865 | 46900561 ~ 46901123 (+) |
| G513501 | NA | other | upstream | 680403 | 46359956 ~ 46360585 (+) |
| LOC110526042 | LOC106584891 | other | upstream | 850696 | 46076084 ~ 46190292 (+) |
| G514662 | LOC106597055 | other | downstream | 261742 | 47303183 ~ 47329244 (+) |
| G514665 | NA | other | downstream | 264997 | 47306438 ~ 47320050 (+) |
| LOC118964881 | LOC106585521 | other | downstream | 472345 | 47425001 ~ 47519480 (+) |
| G515069 | NA | other | downstream | 908565 | 47950006 ~ 47952254 (+) |
| G515189 | LOC100135962 | other | downstream | 1510178 | 48532377 ~ 48587888 (+) |
