G514614


Basic Information

Item Value
gene id G514614
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 47237492 ~ 47237777 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU583754
TTTTATTGTGGCTATAATGCACTCCCCCGCCTCCCCAAAAAAGATAATGCCTTTTGCAGCACTTCTCACTCATACAGCTCTCTATCAGGTCATTAGGTATTTCTCACAGGTGAAGACGGACACACCGGGGGTGCAACTGCACCGTGTACTTATTGAaaatattggaagaactgtccacatttacttttcatcagccatcaagatgagtaggcctaacgaacagcaaaagcactagcctacgTCAATCTACTATTTCTCATAATTCGAAAGTTGACCTACTATATTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU583754 True 286 lncRNA 0.42 1 47237492 47237777

Neighbor

gene id symbol gene type direction distance location
LOC110526052 hic2 coding upstream 20058 47150900 ~ 47217434 (+)
si:dkey-88e18.2 il12b coding upstream 118481 47110812 ~ 47119011 (+)
LOC110526907 NA coding upstream 233140 46993596 ~ 47004352 (+)
LOC110526054 NA coding upstream 259364 46935543 ~ 46978128 (+)
LOC118964876 NA coding upstream 302215 46931084 ~ 46935277 (+)
LOC118964877 NA coding downstream 157590 47395367 ~ 47398426 (+)
LOC110526909 LOC106585521 coding downstream 183464 47421241 ~ 47424219 (+)
LOC110526910 LOC106585521 coding downstream 213068 47450664 ~ 47494972 (+)
LOC118964881 LOC106585521 coding downstream 275855 47425001 ~ 47519480 (+)
LOC118964880 LOC106585521 coding downstream 301544 47539321 ~ 47543002 (+)
G514545 NA non-coding upstream 56425 47108233 ~ 47181067 (+)
G514541 NA non-coding upstream 133930 47103352 ~ 47103562 (+)
G514530 NA non-coding upstream 158612 47078673 ~ 47078880 (+)
G514461 NA non-coding upstream 196051 47040988 ~ 47041441 (+)
G514457 NA non-coding upstream 197298 47033873 ~ 47040194 (+)
G514628 NA non-coding downstream 17904 47255681 ~ 47256160 (+)
G514639 NA non-coding downstream 29842 47267619 ~ 47267921 (+)
G514641 NA non-coding downstream 31266 47269043 ~ 47269331 (+)
G514632 NA non-coding downstream 43723 47281500 ~ 47284426 (+)
G514656 NA non-coding downstream 57098 47294875 ~ 47295076 (+)
G514499 NA other upstream 214400 47022294 ~ 47023092 (+)
G514464 NA other upstream 309778 46926842 ~ 46927714 (+)
G513745 NA other upstream 336369 46900561 ~ 46901123 (+)
G513501 NA other upstream 876907 46359956 ~ 46360585 (+)
LOC110526042 LOC106584891 other upstream 1047200 46076084 ~ 46190292 (+)
G514662 LOC106597055 other downstream 65406 47303183 ~ 47329244 (+)
G514665 NA other downstream 68661 47306438 ~ 47320050 (+)
G515069 NA other downstream 712229 47950006 ~ 47952254 (+)
G515189 LOC100135962 other downstream 1313842 48532377 ~ 48587888 (+)

Expression


Co-expression Network