G514942



Basic Information


Item Value
gene id G514942
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 47289965 ~ 47290344 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU584129
CACACAGGTGCCACTCCTTccttgcccgggcggtgtgtttgggatcattgtcatgctgaaagacccagccacgtttcatcttcaatgcccttgctgatggtaggctttgttactttggtcccagctctctgcaggtcattcactgtgtggttctgggatttttgctcaccattcttgtgatcactttgaccccacagggtgagatcttgcgtggagccccagatcgagggagattatcagtggtcttgtatatcttccatttccttataattgctcccacagttgatttattcaaaccaagctgcttacctattgcagattcagtcttcccagcctggtgcaggtctacaattttgtttctggtgtcctttgacagctct

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU584129 True 380 lncRNA 0.48 1 47289965 47290344

Neighbor


gene id symbol gene type direction distance location
utp15 utp15 coding downstream 233160 47045493 ~ 47056805 (-)
LOC110526055 samd3 coding downstream 309188 46971364 ~ 46980777 (-)
rnf215 rnf215 coding downstream 818833 46461363 ~ 46471132 (-)
LOC110526044 LOC107699739 coding downstream 859358 46367701 ~ 46430607 (-)
apba1a apba1 coding downstream 929983 46263121 ~ 46360886 (-)
LOC118965029 NA coding upstream 56490 47346834 ~ 47349012 (-)
LOC118965030 NA coding upstream 61367 47351711 ~ 47353889 (-)
LOC118964878 LOC106585477 coding upstream 216819 47507163 ~ 47511010 (-)
LOC118964883 LOC106585477 coding upstream 243472 47533816 ~ 47534526 (-)
LOC118964884 LOC106585477 coding upstream 375470 47665814 ~ 47667571 (-)
G514941 NA non-coding downstream 91 47289666 ~ 47289874 (-)
G514937 NA non-coding downstream 5546 47281565 ~ 47284419 (-)
G514936 NA non-coding downstream 9016 47280718 ~ 47280949 (-)
G514935 NA non-coding downstream 9432 47280303 ~ 47280533 (-)
G514931 NA non-coding downstream 12095 47277629 ~ 47277870 (-)
G514945 NA non-coding upstream 2276 47292620 ~ 47292861 (-)
G514949 NA non-coding upstream 7101 47297445 ~ 47297656 (-)
G514974 NA non-coding upstream 56746 47347090 ~ 47352269 (-)
G515001 NA non-coding upstream 131740 47422084 ~ 47422584 (-)
G515028 NA non-coding upstream 189003 47479347 ~ 47488717 (-)
G514777 NA other downstream 273469 47016162 ~ 47016496 (-)
G514434 NA other downstream 379015 46910658 ~ 46910950 (-)
znrf3 LOC106584905 other downstream 2013578 45270568 ~ 45384850 (-)
G515094 LOC106585477 other upstream 684449 47974793 ~ 47976975 (-)
G515122 LOC106585477 other upstream 973649 48263993 ~ 48264977 (-)
LOC110512142 LOC106585477 other upstream 1002502 48292846 ~ 48318495 (-)
G515139 LOC106585477 other upstream 1029403 48319747 ~ 48320588 (-)
LOC118964892 LOC106585477 other upstream 1085602 48375946 ~ 48387076 (-)

Expression



Co-expression Network